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19 records returned. Click the hyperlinks for detailed information.

Isolate fields											MLST								Ribosomal MLST		scgMLST629_S					AbST		CbST		RmST		SmST		YbST
id	isolate	aliases	taxonomic designation	phylogroup from ST	QC status	source type	host	source details	infection	K typing method	gapA	infB	mdh	pgi	phoE	rpoB	tonB	ST	rST	species	scgST	LINcode	Phylogroup	Sublineage	Clonal group	ST	iuc lineage	ST	clb lineage	ST	rmp lineage	ST	iro lineage	ST	lineage ICE
1509	BJ1-GA	SB4496	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Liver pus	Liver abscess		2	1	1	1	1	4	19	380	19225	Klebsiella pneumoniae	11	0_0_339_1_0_0_0_0_0_0	Kp1	SL380	CG10118	14	iuc 2	1	clb 1	7	rmp 2; KpVP-2	3	iro 2	1	ybt 12; ICEKp10
1527	SA17	SB4386	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Pneumonia		2	1	1	1	1	4	19	380	19225	Klebsiella pneumoniae	9703	0_0_339_1_14_0_0_0_0_0	Kp1	SL380	CG10118	14	iuc 2					3	iro 2
1529	BJ2-KE	SB4449	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Liver pus	Liver abscess		2	1	1	82	1	4	19	679	19225	Klebsiella pneumoniae	9705	0_0_339_1_15_0_0_0_0_0	Kp1	SL380	CG10118	11	iuc 2			5	rmp 2; KpVP-2	3	iro 2	3	ybt 12; ICEKp10
1534	SA25	21677064; SB4533	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Severe Sepsis		2	1	1	1	1	4	19	380	19225	Klebsiella pneumoniae	9710	0_0_339_1_11_0_0_0_0_0	Kp1	SL380	CG10118	14	iuc 2	10	clb 1	7	rmp 2; KpVP-2	3	iro 2	4	ybt 12; ICEKp10
1535	SA26	SB4534	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Pneumonia		2	1	1	1	1	4	19	380	19225	Klebsiella pneumoniae	9711	0_0_339_1_13_0_0_0_0_0	Kp1	SL380	CG10118	14	iuc 2			7	rmp 2; KpVP-2	3	iro 2	1	ybt 12; ICEKp10
1538	L8	SB4539	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Severe pneumonia		2	1	1	1	1	4	19	380	19225	Klebsiella pneumoniae	9713	0_0_339_1_12_0_0_0_0_0	Kp1	SL380	CG10118	14	iuc 2	11	clb 1			3	iro 2	2	ybt 12; ICEKp10
4659	SB5613	1379	K. pneumoniae	Kp1 (7 loci)	0000		pregnant woman	Fecal sample	carriage		2	1	1	1	1	4	19	380	139311	Klebsiella pneumoniae	13280	0_0_339_1_18_0_0_0_0_0	Kp1	SL380	CG10118	14	iuc 2					3	iro 2
6212	SB5963		K. pneumoniae	Kp1 (7 loci)	0000		pregnant woman	Fecal sample	carriage		2	1	1	1	1	4	19	380	139365	Klebsiella pneumoniae	13635	0_0_339_1_17_0_0_0_0_0	Kp1	SL380	CG10118							3	iro 2
9640	CMKP01	PJAM	K. pneumoniae		0000		Human	CSF	Meningitis		2	1	1	1	1	4	19	380	19225	Klebsiella pneumoniae	14591	0_0_339_1_22_0_0_0_0_0	Kp1	SL380	CG10118	14	iuc 2			7	rmp 2; KpVP-2	3	iro 2
13369	SPARK_1760_C1		K. pneumoniae		0000	Human	Human	Faeces			2	1	1	1	1	4	19	380	139365	Klebsiella pneumoniae	10472	0_0_339_1_16_0_0_0_0_0	Kp1	SL380	CG10118	14	iuc 2			7	rmp 2; KpVP-2	3	iro 2
21838	585	KP585	K. pneumoniae		0000	Human	Human	sputum			2	1	1	82	1	4	336	6026	200452	Klebsiella pneumoniae	16237	0_0_339_3_0_0_0_0_0_0	Kp1	SL380	CG12351	14	iuc 2			7	rmp 2; KpVP-2
47265	GCA_001077215.1	912_KPNE	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	1	1	1	1	4	19	380	43376	Klebsiella pneumoniae	591	0_0_339_0_0_0_0_0_1_0	Kp1	SL380	CG380	14	iuc 2			7	rmp 2; KpVP-2	12	iro 2	143	ybt 14; ICEKp12
47266	GCA_001067895.1	913_KPNE	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	1	1	1	1	4	19	380			592	0_0_339_0_0_0_0_0_0_0	Kp1	SL380	CG380	14	iuc 2					12	iro 2	143	ybt 14; ICEKp12
49135	GCA_900515205.1	EuSCAPE_IT163	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	1	1	1	1	4	19	380	19225	Klebsiella pneumoniae	2104	0_0_339_1_1_0_0_0_0_0	Kp1	SL380	CG10118
50057	GCA_003065165.1	hvKP4	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	152	1	1	1	4	19	3690	79637	Klebsiella pneumoniae	2801	0_0_339_2_0_0_0_0_0_0	Kp1	SL380	CG3690
51445	GCA_001068335.1	977.rep2_SDYS	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	1	1	1	1	4	19	380	43376	Klebsiella pneumoniae	3990	0_0_339_0_0_0_0_0_0_0	Kp1	SL380	CG380
51593	GCA_000529705.1	BJ1-GA	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	1	1	1	1	4	19	380	19225	Klebsiella pneumoniae	11	0_0_339_1_0_0_0_0_0_0	Kp1	SL380	CG10118
53615	GCA_001067955.1	930_KPNE	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	1	1	1	1	4	19	380	43376	Klebsiella pneumoniae	593	0_0_339_0_0_0_0_0_0_0	Kp1	SL380	CG380	14	iuc 2			7	rmp 2; KpVP-2	12	iro 2	143	ybt 14; ICEKp12
54015	GCA_001067975.1	977.rep1_SDYS	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	1	1	1	1	4	19	380	43376	Klebsiella pneumoniae	592,593,3990,8421	0_0_339_0_0_0_0_0_0_0	Kp1	SL380	CG380

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belonging to any project
not belonging to any project
Barbier et al_ApplEnvironMicrobiol_2020
Bialek et al 2014_EID
Biedrzycka et al 2021_JAC
BIRDY_Madagascar
Bowers et al 2015_PlosOne
CG258-TP
Dataset1_ST147_SARA_cours
Dataset2_CG147_SARA_cours
Ellington et al. 2019
Ezzat_2021
Garcia-Fierro et al 2022_JAC
GenEpi-Bio_DS_1
GenEpi-Bio_DS_2
Gorrie et al. 2017
Hennart_et_al_2022_full_collection
Hennart et al. 2022_MBE
Huynh et al 2020 Gut Microbes
Isolates Excluded (failed QC)
Isolates Exlcuded (contigs size)
Martin et al 2021_PNAS
Musicha et al. 2019
OkomoEtAl2020
Outbreaks
Plasmids
project_RI_JG_SB
Public isolates
published_genomes
Raffelsberger et al 2021_GutMicrobes
Rodrigues et al 2022_MGen
Rodrigues et al 2022_MSpectrum
Rollin et al 2022_IJID
SPARK project
ST258_ST512_ST1199
Test cg634 nomemclature