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Allele designations/scheme field values
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5 records returned. Click the hyperlinks for detailed information.

Isolate fields											MLST								Ribosomal MLST		scgMLST629_S					AbST		CbST		RmST		SmST		YbST
id	isolate	aliases	taxonomic designation	phylogroup from ST	QC status	source type	host	source details	infection	K typing method	gapA	infB	mdh	pgi	phoE	rpoB	tonB	ST	rST	species	scgST	LINcode	Phylogroup	Sublineage	Clonal group	ST	iuc lineage	ST	clb lineage	ST	rmp lineage	ST	iro lineage	ST	lineage ICE
4438	SB5392	819	K. pneumoniae	Kp1 (7 loci)	0000		pregnant woman	Fecal sample	carriage		2	3	1	4	6	2	38	2467	139258	Klebsiella pneumoniae	13119	0_0_501_3_0_0_0_0_0_0	Kp1	SL10331	CG11649
4447	SB5401	831	K. pneumoniae	Kp1 (7 loci)	0000		pregnant woman	Fecal sample	carriage		2	3	1	4	6	2	38	2467	139258	Klebsiella pneumoniae	13119	0_0_501_3_0_0_0_0_0_0	Kp1	SL10331	CG11649
9518	SB6460	MVK-03E128	K. pneumoniae		0000	Environment	Environment	leaves			2	3	1	1	1	2	38	4420	139545	Klebsiella pneumoniae	8447	0_0_501_0_0_0_0_0_0_0	Kp1	SL10331	CG10747
13328	SPARK_1672_C3		K. pneumoniae		0000	Animal	Bull	Rectal swab			2	3	1	4	7	2	38	5095	200535	Klebsiella pneumoniae	10450	0_0_501_2_0_0_0_0_0_0	Kp1	SL10331	CG11028
15696	Klebsequi138		K. pneumoniae			Animal	Horse	Unknown	Unknown		2	3	1	4	1	2	38	5420	200535	Klebsiella pneumoniae	11155,11607	0_0_501_1_0_0_0_0_0_0	Kp1	SL10331	CG11171

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belonging to any project
not belonging to any project
Barbier et al_ApplEnvironMicrobiol_2020
Bialek et al 2014_EID
Biedrzycka et al 2021_JAC
BIRDY_Madagascar
Bowers et al 2015_PlosOne
CG258-TP
Dataset1_ST147_SARA_cours
Dataset2_CG147_SARA_cours
Ellington et al. 2019
Ezzat_2021
Garcia-Fierro et al 2022_JAC
GenEpi-Bio_DS_1
GenEpi-Bio_DS_2
Gorrie et al. 2017
Hennart_et_al_2022_full_collection
Hennart et al. 2022_MBE
Huynh et al 2020 Gut Microbes
Isolates Excluded (failed QC)
Isolates Exlcuded (contigs size)
Martin et al 2021_PNAS
Musicha et al. 2019
OkomoEtAl2020
Outbreaks
Plasmids
project_RI_JG_SB
Public isolates
published_genomes
Raffelsberger et al 2021_GutMicrobes
Rodrigues et al 2022_MGen
Rodrigues et al 2022_MSpectrum
Rollin et al 2022_IJID
SPARK project
ST258_ST512_ST1199
Test cg634 nomemclature