Full information on isolate ZUL30220039-S (id:225)

Projects

This isolate is a member of the following project:

Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
225
taxonomic designation
K. kingae
isolate
ZUL30220039-S
PFGE clone
Unknown
penicillinase
Unknown
isolation year
2013
country of isolation
France
city or region
Paris
laboratory source
Unknown
sample origin
Pharynx
disease
Carrier
class of disease
Carrier
age in months
Unknown
gender
Unknown
sender
Omer Murik, Infectious disease unit and Translational genomics laboratory, Shaare Zedek Medical Center, Jerusalem, Israel
curator
Auto Tagger
update history
2 updates show details
date entered
2021-11-25
datestamp
2021-11-25

Sequence bin

contigs
142
total length
1,943,658 bp
max length
102,880 bp
mean length
13,688 bp
N50
39,192
L50
14
N90
9,409
L90
47
N95
4,457
L95
63
loci tagged
6

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
17  S 
adk (adk)
1  S 
aroE (aroE)
1  S 
cpn60 (cpn60)
11  S 
gdh (gdh)
1  S 
recA (recA)
8  S 
ST
50

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