Full information on isolate ZUL30220039-S (id:225)
Projects
This isolate is a member of the following project:
- Murik_2021
- Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.
Provenance/primary metadata
- id
- 225
- taxonomic designation
- K. kingae
- isolate
- ZUL30220039-S
- PFGE clone
- Unknown
- penicillinase
- Unknown
- isolation year
- 2013
- country of isolation
- France
- city or region
- Paris
- laboratory source
- Unknown
- sample origin
- Pharynx
- disease
- Carrier
- class of disease
- Carrier
- age in months
- Unknown
- gender
- Unknown
- sender
- Omer Murik, Infectious disease unit and Translational genomics laboratory, Shaare Zedek Medical Center, Jerusalem, Israel
- curator
- Auto Tagger
- update history
- 2 updates show details
- date entered
- 2021-11-25
- datestamp
- 2021-11-25
Sequence bin
- contigs
- 142
- total length
- 1,943,658 bp
- max length
- 102,880 bp
- mean length
- 13,688 bp
- N50
- 39,192
- L50
- 14
- N90
- 9,409
- L90
- 47
- N95
- 4,457
- L95
- 63
- %GC
- 46.62
- Ns
- 97
- gaps
- 1
- loci tagged
- 6
Schemes and loci
Tools
Export:
Analysis: