Full information on isolate KK98 (id:210)
Projects
This isolate is a member of the following project:
- Murik_2021
- Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.
Provenance/primary metadata
- id
- 210
- taxonomic designation
- K. kingae
- isolate
- KK98
- PFGE clone
- B
- penicillinase
- Negative
- isolation year
- 1992
- country of isolation
- Israel
- city or region
- South
- laboratory source
- SMC
- sample origin
- Blood
- disease
- Bacteremia
- class of disease
- Bacteremia
- age in months
- 10 mo
- gender
- M
- sender
- Omer Murik, Infectious disease unit and Translational genomics laboratory, Shaare Zedek Medical Center, Jerusalem, Israel
- curator
- Auto Tagger
- update history
- 2 updates show details
- date entered
- 2021-11-25
- datestamp
- 2021-11-25
Sequence bin
- contigs
- 129
- total length
- 1,961,070 bp
- max length
- 147,774 bp
- mean length
- 15,203 bp
- N50
- 43,109
- L50
- 13
- N90
- 9,977
- L90
- 47
- N95
- 4,913
- L95
- 62
- %GC
- 46.66
- Ns
- 197
- gaps
- 2
- loci tagged
- 6
Schemes and loci
Tools
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