Full information on isolate KK92 (id:209)

Projects

This isolate is a member of the following project:

Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
209
taxonomic designation
K. kingae
isolate
KK92
PFGE clone
K
penicillinase
Negative
isolation year
1996
country of isolation
Israel
city or region
North
laboratory source
Carmel
sample origin
Blood
disease
Bacteremia
class of disease
Bacteremia
age in months
Child
gender
Unknown
sender
Omer Murik, Infectious disease unit and Translational genomics laboratory, Shaare Zedek Medical Center, Jerusalem, Israel
curator
Auto Tagger
update history
2 updates show details
date entered
2021-11-25
datestamp
2021-11-25

Sequence bin

contigs
159
total length
1,993,232 bp
max length
132,082 bp
mean length
12,537 bp
N50
36,031
L50
13
N90
8,443
L90
54
N95
3,680
L95
73
loci tagged
6

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
5  S 
adk (adk)
2  S 
aroE (aroE)
4  S 
cpn60 (cpn60)
5  S 
gdh (gdh)
5  S 
recA (recA)
1  S 
ST
6

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