Full information on isolate KK416 (id:190)
Projects
This isolate is a member of the following project:
- Murik_2021
- Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.
Provenance/primary metadata
- id
- 190
- taxonomic designation
- K. kingae
- isolate
- KK416
- PFGE clone
- M
- penicillinase
- Negative
- isolation year
- 2011
- country of isolation
- Israel
- city or region
- East
- laboratory source
- SZ
- sample origin
- blood
- disease
- Endocarditis
- class of disease
- Endocarditis
- age in months
- Child
- gender
- ?
- sender
- Omer Murik, Infectious disease unit and Translational genomics laboratory, Shaare Zedek Medical Center, Jerusalem, Israel
- curator
- Federica Palma, Institut Pasteur, Paris, France (E-mail: federica.palma@pasteur.fr)
- update history
- 2 updates show details
- date entered
- 2021-11-25
- datestamp
- 2021-11-29
Sequence bin
- contigs
- 142
- total length
- 1,983,805 bp
- max length
- 154,881 bp
- mean length
- 13,971 bp
- N50
- 67,314
- L50
- 10
- N90
- 12,782
- L90
- 38
- N95
- 4,886
- L95
- 51
- %GC
- 46.60
- Ns
- 98
- gaps
- 1
- loci tagged
- 6
Schemes and loci
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