Sequence bin for 14SP

Contig summary statistics

Contigs
51
Total length
2,522,530
Minimum length
339
Maximum length
357,792
Mean length
49,462
N50
133,978
L50
7
N90
48,200
L90
18
N95
34,904
L95
22

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
128354Illumina14SP_contig_1 length 357792 coverage 354.9 normalized_cov 0.97357792BACT000020 (rpsT) 28713122 EMBL GBK
SE1269 65807557
SE1268 75868218
SE1264 1230413065
SE1263 1306214417
SE1262 1454214718
BACT000021 (rpsU) 1454214718
SE1261 1556516275
SE1257 1921719684
SE1247 2892429613
SE1246 2960330703
SE1241 3486935288
SE1240 3569236291
BACT000062 (rpmG) 3888439033
SE1234 4121041410
SE1228 4542445750
SE1227 4572846177
SE1224 4703747549
SE1217 5349554325
SE1214 5527956340
SE1213 5636756924
SE1207 6191963277
SE1206 6328963651
SE1204 6413265469
SE1203 6546265692
SE1198 7071271710
SE1197 7170372686
SE1194 7467375650
SE1190 8069781587
SE1187 8368984609
SE1183 8759688138
SE1182 8824388692
SE1181 8873589622
SE1179 9022891028
SE1172 9644896696
BACT000001 (rpsA) 104193105371
SE1163 105587106897
SE1160 108087108359
SE1158 109407110132
SE1147 119083119400
SE1142 125568126860
SE1141 126954127640
SE1137 131039131668
SE1135 132353132919
SE1134 132933133271
SE1133 133914135050
SE1125 173208173402
SE1124 173414173674
SE1115 179818180318
SE1114 180318180542
SE1111 182698183201
SE1095 200124200303
SE1094 200498201307
SE1092 201713202504
x_6 208259208567
SE1076 216452217174
SE1067 227371228246
SE1066 228253228900
SE1058 237845239098
SE1057 239124240377
SE1049 245839246405
SE1047 248459249547
SE1037 259956262358
SE1035 264559265167
SE1033 265755266222
SE1026 276758276985
SE1023 279806280039
BACT000062 (rpmG) 283761283910
SE0996 302531302728
SE0982 317173317412
SE0981 317366318364
SE0979 319524321197
SE0978 321374322873
SE0973 329542330036
SE0972 330060330425
SE0970 332313332603
SE0969 332660333277
SE0968 333875334741
SE0967 334742336502
SE0965 337572337787
SE0964 337876339435
SE0960 342468343049
SE0959 343078343470
SE0957 344470345174
SE0956 345171346460
SE0955 346460347731
SE0954 347761348474
SE0950 355416355685
BACT000015 (rpsO) 355416355685
SE0949 355804356775
128373Illumina14SP_contig_2 length 223012 coverage 360.0 normalized_cov 0.99223012SE0713 1565316771 EMBL GBK
x_4 1626016568
SE0717 1981620991
SE0719 2298523230
SE0726 3106231664
SE0727 3167031855
SE0729 3312433342
SE0744 4019341866
SE0756 5719857488
SE0757 5748558090
SE0758 5808060068
SE0760 6173062047
SE0761 6242163281
SE0762 6348663968
SE0763 6395565082
SE0764 6508365787
SE0765 6578766047
SE0766 6604966720
SE0769 7035871389
SE0770 7138971955
SE0771 7197273450
SE0777 8036080494
SE0778 8064681938
SE0779 8224683418
SE0780 8347884017
SE0781 8417384439
SE0788 9260392821
SE0793 9700998310
x_5 9734797682
SE0794 9831599721
SE0796 100450100989
SE0797 101001102095
SE0804 108602109213
SE0806 110786110977
SE0810 113183113665
SE0811 113810114085
SE0816 121849122310
SE0817 122750123802
SE0818 123823124257
SE0822 126189126578
SE0823 126645127187
SE0826 129344129898
BACT000061 (rpmF) 129976130149
SE0832 135400137802
SE0834 139039139305
SE0838 144229144543
SE0840 146791147405
PSM-b3_SERP0736 152868153029
PSM-b2_SERP0737 153088153219
PSM-b1_SERP0738 153274153405
PSM-b1_SERP0738 153274153399
PSM-b1_SERP0738 153464153589
PSM-b1_SERP0738 153464153595
SE0853 156877157308
SE0854 157323158258
SE0857 161169162134
SE0858 162136163485
SE0862 168027168818
SE0865 170131170421
SE0873 178919179446
SE0875 179679180986
SE0877 181911183188
SE0879 184282187455
SE0882 188802189026
SE0885 192004192627
SE0889 197091197294
SE0893 200236201330
SE0894 201337202080
SE0896 204370205260
BACT000057 (rpmB) 206629206817
SE0899 206629206817
SE0900 207175207549
SE0911 221127221459
128347Illumina14SP_contig_3 length 164190 coverage 393.8 normalized_cov 1.08164190SE1522 2379923903 EMBL GBK
SE1519 2595626327
SE1516 2769228915
SE1514 3002530528
SE1461 8904489520
SE1457 9378694694
SE1451 9631196676
SE1443 100306101157
SE1440 104471105109
SE1422 135239136039
SE1412 145211145702
SE1410 147438148529
SE1409 148785149774
SE1406 153245154510
SE1404 156219156842
128360Illumina14SP_contig_4 length 163984 coverage 379.0 normalized_cov 1.04163984SE0284 50575518 EMBL GBK
SE0285 55396102
SE0286 60927099
SE0290 1316614620
x_2 1326013625
SE0291 1501715658
SE0292 1564217042
SE0293 1703517433
SE0294 1742318190
SE0295 1818718714
BACT000062 (rpmG) 1948319626
SE0298 1968919871
SE0299 1988220430
BACT000040 (rplK) 2076121183
BACT000030 (rplA) 2139722092
SE0301 2139722092
SE0303 2236722867
BACT000039 (rplJ) 2236722867
SE0304 2290523273
BACT000036 (rplL) 2290523273
SE0308 3192332183
BACT000012 (rpsL) 3227432687
BACT000007 (rpsG) 3275833228
SE0310 3275833228
fusA 3334835429
SE0312 3564836832
SE0318 4234643422
SE0325 5076051422
SE0326 5141552077
SE0337 6200262880
SE0342 6570966257
SE0347 6962169983
SE0359 7944480433
SE0361 8197582895
SE0362 8290083883
SE0363 8389684972
SE0369 9576197059
SE0370 9711697622
SE0374 100531101799
SE0384 109334110278
SE0386 111043111840
SE0395 118035118259
SE0396 118275118481
SE0401 123831124313
SE0405 128265129194
SE0406 129191130027
SE0410 132586133380
SE0424 147584148636
SE0425 149181149687
SE0426 149796150719
SE0427 150738151412
SE0429 152590153351
SE0433 157562158362
SE0437 162597163313
SE0438 163313163789
128367Illumina14SP_contig_5 length 160454 coverage 364.3 normalized_cov 1.00160454SE2126 28973604 EMBL GBK
SE2130 71418520
SE2132 980810872
SE2140 1541516275
SE2141 1626817086
SE2143 1842919133
SE2144 1924520909
SE2156 3215133041
SE2162 4190642352
SE2165 4314144859
SE2174 5464655245
SE2210 110618112267
SE2233 143696144124
SE2243 150149151657
128350Illumina14SP_contig_6 length 154375 coverage 361.5 normalized_cov 0.99154375SE2117 1166512534 EMBL GBK
SE2110 1903420200
SE2107 2249722712
SE2105 2409924491
SE2104 2448825177
SE2103 2522726966
SE2098 3036031412
SE2096 3213132994
SE2093 3489636053
SE2092 3605536507
SE2090 3757937755
SE2089 3775839362
SE2076 4912249733
SE2066 6315664205
SE2063 6656168525
SE2062 6869969313
SE2061 6942170419
SE2060 7042171188
SE2059 7119071390
SE2055 7518475474
SE2046 8391284592
SE2038 9629496485
SE2031 104571104759
SE2024 111522112298
SE2014 123688124389
SE2013 124393124851
SE2010 127924129324
SE1996 144845145732
SE1995 146006146692
SE1993 147199147987
128387Illumina14SP_contig_7 length 133978 coverage 376.6 normalized_cov 1.03133978SE2253 56506465 EMBL GBK
SE2254 64627262
SE2255 72648037
SE2258 1098912524
SE0271 2270923323
SE0249 4557546078
SE0247 4802549428
SE0238 6604066414
SE0237 6641866993
SE0234 6943470399
SE0230 7220772431
SE0219 8271283614
SE0197 106489107262
SE0183 122617122940
128385Illumina14SP_contig_8 length 126180 coverage 349.4 normalized_cov 0.96126180BACT000004 (rpsD) 55657 EMBL GBK
SE1396 55657
SE1395 689805
SE1391 46465869
x_7 58666228
SE1389 69137407
SE1384 1061211727
SE1381 1396814381
SE1380 1457915877
SE1373 2467226429
SE1369 3143232142
SE1366 3679437666
SE1361 3915940184
SE1358 4254543465
BACT000064 (rpmI) 4844948649
BACT000049 (rplT) 4869949055
SE1353 4869949055
SE1351 5010351026
SE1346 5627457086
SE1344 5809858778
SE1340 6257663136
SE1338 6611967384
SE1335 6901969198
BACT000050 (rplU) 7194572253
SE1329 7225872578
SE1328 7259072874
BACT000056 (rpmA) 7259072874
SE1326 7431574779
SE1325 7479275394
SE1317 8404484562
SE1314 8727987731
SE1313 8772888603
SE1308 9487895300
SE1305 9707498216
SE1300 105622105882
SE1298 106327106635
SE1296 107702108625
SE1278 121872122225
128381Illumina14SP_contig_9 length 120146 coverage 364.7 normalized_cov 1.00120146SE1661 16172186 EMBL GBK
SE1656 72977530
x_9 94559712
x_8 1017810519
SE1653 1145611917
SE1652 1189812560
SE1647 1833518970
SE1645 2058120805
Hld_SERP1489 2940629480
Hld_SERP1489 2940829479
SE1625 4910149478
SE1624 4947850392
SE1596 6773668563
SE1595 6863869264
SE1594 6923669427
SE1593 6983871133
SE1592 7125871560
SE1591 7188472576
SE1586 8023380535
SE1585 8053781994
SE1576 9095191676
SE1575 9211392649
SE1571 9527695977
SE1570 9597497020
SE1569 9701097639
SE1567 9928099564
SE1566 99572100036
SE1565 100178100393
SE1562 102383103525
SE1561 103684103845
SE1553 109854110828
SE1552 111008112051
SE1551 112158112700
SE1548 116230117519
128375Illumina14SP_contig_10 length 94734 coverage 357.1 normalized_cov 0.9894734SE0441 21272312 EMBL GBK
SE0442 26013200
SE0448 76247920
SE0450 89139479
SE0454 1157512447
SE0459 1688817814
SE0471 2737428294
SE0473 3060431776
SE0480 3753938012
SE0485 3980140514
SE0487 4093941610
SE0491 4429444500
SE0492 4451945250
SE0493 4523846242
SE0501 5283354614
SE0503 5578257296
SE0505 5867659215
SE0511 6613967014
SE0512 6776768165
SE0517 7348174260
SE0519 7553475848
SE0524 7919380323
SE0526 8167482168
SE0528 8314184217
SE0530 8571286353
SE0531 8649887364
128352Illumina14SP_contig_11 length 91728 coverage 349.3 normalized_cov 0.9691728CcrA_SERP2498 9031591661 EMBL GBK
128364Illumina14SP_contig_12 length 79041 coverage 373.2 normalized_cov 1.0279041SE1739 1211712527 EMBL GBK
SE1738 1271413160
SE1737 1328313993
SE1736 1420014862
SE1728 2203022827
SE1725 2497426581
SE1723 2754928409
BACT000060 (rpmE) 3361833875
SE1718 3361833875
SE1707 4216242512
SE1706 4253843266
SE1705 4330943521
SE1704 4361944134
SE1703 4413444673
SE1702 4469646207
SE1701 4629447160
SE1700 4718248594
SE1699 4861449018
x_10 4916749400
SE1697 5080951246
SE1696 5156452004
SE1694 5297853637
SE1692 5460355424
SE1688 5791758570
SE1686 6040960702
SE1682 6129762508
SE1679 6563667165
SE1673 7159571765
SE1671 7246973470
SE1670 7357173897
128353Illumina14SP_contig_13 length 77829 coverage 365.7 normalized_cov 1.0077829SE2315 1067811463 EMBL GBK
SE2316 1197512361
SE2321 1722017879
SE2328 2395724685
x_16 2571425962
SE2330 2600426372
PSM-a_SERP0083 3116031225
PSM-d_SERP0082 3127331383
SE2334 3163431897
SE2348 4162143087
SE2350 4439344971
SE2352 4610346768
SE2354 4810649494
SE2357 5173252301
SE2358 5231653839
SE2365 5627456939
SE2368 5785558115
BACT000018 (rpsR) 5868358925
BACT000006 (rpsF) 5950259798
SE2372 5950259798
SE2374 6106661257
ychF 6149062587
SE2377 6282363698
SE2378 6385464696
SE2384 7271773901
128343Illumina14SP_contig_14 length 75885 coverage 353.9 normalized_cov 0.9775885SE0623 350496 EMBL GBK
SE0626 31983434
SE0631 53075627
SE0638 1261112985
SE0640 1458014936
SE0641 1491415207
SE0642 1520715686
SE0644 1717117518
SE0645 1751817946
SE0647 2053720917
SE0648 2098321576
SE0649 2204122421
SE0654 2550226746
SE0662 3458235157
SE0677 5352154462
SE0685 5616157150
SE0690 6003961847
SE0694 6445364800
SE0695 6481765452
128377Illumina14SP_contig_15 length 75445 coverage 355.4 normalized_cov 0.9875445BACT000038 (rplI) 2957130017 EMBL GBK
SE0007 3733638622
x_1 4645246688
SE0002 4712248255
BACT000063 (rpmH) 5067250809
SE2419 5067250809
gidA 5291354790
SE2411 5716857563
SE2405 6171062906
SE2402 6602666217
SE2399 6916369564
SE2398 6958070224
128376Illumina14SP_contig_16 length 73434 coverage 355.6 normalized_cov 0.9873434SE1941 83659039 EMBL GBK
x_13 1847918739
SE1930 1941820050
SE1923 2600126321
SE1921 2631826878
x_12 3532935685
SE1907 3673237667
SE1885 5713857827
SE1878 6798668303
SE1874 7045771527
128378Illumina14SP_contig_17 length 60552 coverage 374.1 normalized_cov 1.0360552SE1757 15613000 EMBL GBK
SE1759 39325269
SE1763 81398399
SE1764 85528866
x_11 1333113729
SE1775 2060820847
SE1778 2330024304
SE1784 3015731134
SE1787 3261333041
BACT000009 (rpsI) 3545035842
SE1790 3545035842
BACT000042 (rplM) 3586236299
SE1792 3655937362
SE1793 3736638172
SE1795 3901939864
BACT000046 (rplQ) 4015940527
SE1796 4015940527
BACT000011 (rpsK) 4156541954
SE1798 4156541954
SE1799 4197742342
BACT000013 (rpsM) 4197742342
SE1800 4236542478
BACT000065 (rpmJ) 4236542478
SE1802 4291743564
BACT000044 (rplO) 4487445314
BACT000059 (rpmD) 4533145510
BACT000005 (rpsE) 4552746027
SE1806 4552746027
SE1807 4604846410
BACT000047 (rplR) 4604846410
BACT000035 (rplF) 4644246978
SE1809 4700347401
BACT000008 (rpsH) 4700347401
SE1810 4743247617
BACT000014 (rpsN) 4743247617
BACT000034 (rplE) 4764048179
SE1811 4764048179
BACT000053 (rplX) 4820548522
SE1812 4820548522
SE1813 4851748939
BACT000043 (rplN) 4856448932
SE1814 4856448932
BACT000017 (rpsQ) 4896349226
SE1815 4896349226
BACT000058 (rpmC) 4925149460
SE1816 4925149460
SE1817 4945049884
BACT000045 (rplP) 4945049884
BACT000003 (rpsC) 4988750540
SE1818 4988750540
BACT000051 (rplV) 5056450917
BACT000019 (rpsS) 5094551223
SE1820 5094551223
BACT000031 (rplB) 5129052123
SE1821 5129052123
BACT000052 (rplW) 5215252427
BACT000033 (rplD) 5242753050
SE1823 5242753050
BACT000032 (rplC) 5307953741
SE1825 5376954077
BACT000010 (rpsJ) 5376954077
128366Illumina14SP_contig_18 length 48200 coverage 362.3 normalized_cov 0.9948200SE0543 79898921 EMBL GBK
SE0544 89279766
SE0550 1491215856
SE0551 1618416768
SE0553 1714318042
SE0557 2135622366
SE0561 2630227606
SE0562 2777228230
SE0563 2829928532
128370Illumina14SP_contig_19 length 38866 coverage 409.6 normalized_cov 1.1238866SE2267 24332912 EMBL GBK
SE2268 29133278
SE2273 91529691
SE2275 1126711668
SE2276 1176212163
SE2277 1218712450
SE2278 1244713637
SE2279 1363415175
SE2281 1867119243
SE2282 1950320162
SE2283 2033221297
SE2284 2144222797
SE2285 2340823716
SE2286 2377624156
SE2288 2501725865
SE2289 2625726520
SE2290 2662027510
SE2292 2826329036
SE2295 3208432332
SE2297 3314633493
SE2299 3431535241
128340Illumina14SP_contig_20 length 36650 coverage 348.9 normalized_cov 0.9636650PSM-e 25032574 EMBL GBK
SE0584 69207108
x_3 71337390
SE0593 1158012122
SE0596 1329213672
SE0599 1437414670
SE0604 1807318264
SE0609 2297323437
SE0613 2658627611
SE0615 2884029667
SE0617 3116132075
SE0619 3398634252
SE0620 3437134805
128384Illumina14SP_contig_21 length 35069 coverage 357.4 normalized_cov 0.9835069SE1948 8342999 EMBL GBK
SE1950 40535045
SE1951 51165517
SE1952 55866002
x_14 1673517091
SE1971 2326623718
SE1976 3038231317
SE1977 3130831622
128359Illumina14SP_contig_22 length 34904 coverage 359.3 normalized_cov 0.9934904SE1869 33333656 EMBL GBK
SE1866 53465960
SE1865 59736662
SE1861 92549556
SE1856 1366414212
SE1851 1692717598
SE1846 2045921718
SE1843 2264122874
128351Illumina14SP_contig_23 length 26135 coverage 368.0 normalized_cov 1.0126135SE0947 62412 EMBL GBK
SE0944 28803197
SE0943 31973481
SE0941 47445211
SE0937 1319113973
SE0934 1553916261
BACT000002 (rpsB) 1743218220
SE0929 2084721389
SE0928 2139322283
128342Illumina14SP_contig_24 length 13478 coverage 372.4 normalized_cov 1.0213478SE0924 16872595 EMBL GBK
SE0922 38914661
SE0921 46665529
SE0916 1123011580
BACT000048 (rplS) 1123011580
SE0915 1168512422
SE0914 1242212925
BACT000016 (rpsP) 1305213327
128346Illumina14SP_contig_25 length 10914 coverage 356.6 normalized_cov 0.9810914mecA 25604566 EMBL GBK
128363Illumina14SP_contig_26 length 6679 coverage 339.9 normalized_cov 0.936679SE0575 59706164 EMBL GBK
128348 Illumina 14SP_contig_27 length 5513 coverage 404.2 normalized_cov 1.11 5513
128362 Illumina 14SP_contig_28 length 4038 coverage 344.9 normalized_cov 0.95 4038
128379 Illumina 14SP_contig_29 length 3805 coverage 385.3 normalized_cov 1.06 3805
128382 Illumina 14SP_contig_30 length 3022 coverage 344.1 normalized_cov 0.94 3022
128383 Illumina 14SP_contig_31 length 2947 coverage 2242.0 normalized_cov 6.15 2947
128349 Illumina 14SP_contig_32 length 2724 coverage 341.1 normalized_cov 0.94 2724
128371 Illumina 14SP_contig_33 length 2215 coverage 319.5 normalized_cov 0.88 2215
128358Illumina14SP_contig_34 length 1918 coverage 679.0 normalized_cov 1.861918Acetyltransferase_SERP1586 7396 EMBL GBK
128388 Illumina 14SP_contig_35 length 1591 coverage 2197.8 normalized_cov 6.03 1591
128369 Illumina 14SP_contig_36 length 1425 coverage 2362.2 normalized_cov 6.48 1425
128344Illumina14SP_contig_37 length 1264 coverage 2722.3 normalized_cov 7.471264IS256-like_SERP0915 421211 EMBL GBK
128368 Illumina 14SP_contig_38 length 1133 coverage 334.1 normalized_cov 0.92 1133
128386 Illumina 14SP_contig_39 length 791 coverage 564.9 normalized_cov 1.55 791
128357 Illumina 14SP_contig_40 length 777 coverage 342.1 normalized_cov 0.94 777
128341 Illumina 14SP_contig_41 length 742 coverage 636.7 normalized_cov 1.75 742
128345 Illumina 14SP_contig_42 length 690 coverage 267.8 normalized_cov 0.74 690
128356 Illumina 14SP_contig_43 length 684 coverage 368.2 normalized_cov 1.01 684
128361 Illumina 14SP_contig_44 length 617 coverage 1298.6 normalized_cov 3.56 617
128374 Illumina 14SP_contig_46 length 497 coverage 302.0 normalized_cov 0.83 497
128372 Illumina 14SP_contig_45 length 495 coverage 248.5 normalized_cov 0.68 495
128389 Illumina 14SP_contig_47 length 484 coverage 409.5 normalized_cov 1.12 484
128365 Illumina 14SP_contig_48 length 432 coverage 985.6 normalized_cov 2.71 432
128339 Illumina 14SP_contig_51 length 375 coverage 303.4 normalized_cov 0.83 375
128380 Illumina 14SP_contig_49 length 358 coverage 750.5 normalized_cov 2.06 358
128355 Illumina 14SP_contig_50 length 339 coverage 213.5 normalized_cov 0.59 339