Full information on isolate NCK_SE0112 (id:732)
Provenance/primary metadata
- id
- 732
- isolate
- NCK_SE0112
- isolation year
- 2016
- world region
- Europe
- country
- France
- city
- Paris
- host
- Human
- source
- blood
- infection
- infection
- other infection info
- broviac catheter
- sender
- Anne Jamet, INSERM
- curator
- Auto Tagger
- update history
- 4 updates show details
- date entered
- 2018-10-31
- datestamp
- 2022-12-22
Sequence bin
- contigs
- 182
- total length
- 2,547,762 bp
- max length
- 254,625 bp
- mean length
- 13,999 bp
- N50
- 88,427
- L50
- 9
- N90
- 19,194
- L90
- 30
- N95
- 7,887
- L95
- 41
- %GC
- 32.10
- Ns
- 21
- gaps
- 1
- loci tagged
- 768
Assembly checks
| Check | Status | Warn/fail reason |
|---|---|---|
| Number of contigs | ||
| Assembly size | ||
| Minimum N50 | ||
| %GC |
Schemes and loci
Navigate and select schemes within tree to display allele designations
Tools
Export:
Analysis: