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Full information on isolate NCK_SE0105 (id:728)

Provenance/primary metadata

id
728
isolate
NCK_SE0105
isolation year
2016
world region
Europe
country
France
city
Paris
host
Human
source
blood
infection
commensal
sender
Anne Jamet, INSERM
curator
Auto Tagger
update history
4 updates show details
date entered
2018-10-31
datestamp
2022-12-22

Sequence bin

contigs
319
total length
2,522,908 bp
max length
516,819 bp
mean length
7,909 bp
N50
136,861
L50
6
N90
21,352
L90
21
N95
9,783
L95
29
%GC
32.15
Ns
0
gaps
0
loci tagged
767

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus epidermidis Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus epidermidis 100%

Analysis performed: 2022-12-27

Schemes and loci

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