Full information on isolate CSID_3000515963 (id:72)
Projects
This isolate is a member of the following project:
- public
- Isolates made public
Provenance/primary metadata
- id
- 72
- isolate
- CSID_3000515963
- sender
- Kat Holt, Melbourne U
- curator
- Auto Tagger
- update history
- 7 updates show details
- date entered
- 2016-03-31
- datestamp
- 2023-01-20
- taxonomic designation
- E. anophelis
- isolation year
- 2016
- world region
- North America
- country
- USA
- city
- Wisconsin
- host
- Human
- source
- blood
- source lab
- CDC-SBRL
- comments
- hybrid assemblies (StriDe and SPAdes)
- accession number
- SRR3312986
Sequence bin
- method
- Illumina
- contigs
- 26
- total length
- 3,907,751 bp
- max length
- 1,438,849 bp
- mean length
- 150,299 bp
- N50
- 606,709
- L50
- 2
- N90
- 155,376
- L90
- 7
- N95
- 105,296
- L95
- 9
- %GC
- 35.70
- Ns
- 0
- gaps
- 0
- loci tagged
- 3,442
Assembly checks
| Check | Status | Warn/fail reason |
|---|---|---|
| Number of contigs | ||
| Assembly size | ||
| Minimum N50 | ||
| %GC |
Schemes and loci
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Tools
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