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Full information on isolate CSID_3015183673 (id:65)

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This isolate is a member of the following project:

public
Isolates made public

Provenance/primary metadata

id
65
isolate
CSID_3015183673
sender
Kat Holt, Melbourne U
curator
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update history
6 updates show details
date entered
2016-03-31
datestamp
2023-01-20
taxonomic designation
E. anophelis
isolation year
2016
world region
North America
country
USA
city
Wisconsin
host
Human
source lab
CDC-SBRL
comments
hybrid assemblies (StriDe and SPAdes)
accession number
SRR3240410

Sequence bin

method
Illumina
contigs
12
total length
3,907,422 bp
max length
1,545,987 bp
mean length
325,619 bp
N50
606,933
L50
2
N90
259,257
L90
6
N95
259,257
L95
6
%GC
35.70
Ns
0
gaps
0
loci tagged
3,446

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Elizabethkingia anophelis Bacteroidota > Flavobacteriia > Flavobacteriales > Weeksellaceae > Elizabethkingia > Elizabethkingia anophelis 100%

Analysis performed: 2024-01-14

Schemes and loci

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