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Full information on isolate CSID_3000516068 (id:56)

Projects

This isolate is a member of the following project:

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Isolates made public

Provenance/primary metadata

id
56
isolate
CSID_3000516068
sender
Kat Holt, Melbourne U
curator
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update history
6 updates show details
date entered
2016-03-31
datestamp
2023-01-20
taxonomic designation
E. anophelis
isolation year
2016
world region
North America
country
USA
city
Wisconsin
host
Human
source lab
CDC-SBRL
comments
hybrid assemblies (StriDe and SPAdes)
accession number
SRR3240401

Sequence bin

method
Illumina
contigs
12
total length
3,907,558 bp
max length
1,545,987 bp
mean length
325,630 bp
N50
606,933
L50
2
N90
259,257
L90
6
N95
259,257
L95
6
%GC
35.70
Ns
0
gaps
0
loci tagged
3,444

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Elizabethkingia anophelis Bacteroidota > Flavobacteriia > Flavobacteriales > Weeksellaceae > Elizabethkingia > Elizabethkingia anophelis 100%

Analysis performed: 2024-01-14

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