Full information on isolate 26_scf (id:379)
Provenance/primary metadata
- id
- 379
- isolate
- 26_scf
- sender
- Matthieu Pot, Laboratoire de Microbiologie clinique et Environnementale, CHU de Pointe-à-Pitre, Faculté de médecine, Université des Antilles, Unité Environnement et Santé, Institut Pasteur de Guadeloupe
- curator
- Auto Tagger
- update history
- 3 updates show details
- date entered
- 2024-03-26
- datestamp
- 2024-03-26
- taxonomic designation
- Elizabethkingia anophelis
- world region
- Oceania
- country
- New Caledonia
- city
- Noumea
- host
- Human
Sequence bin
- method
- Illumina
- contigs
- 47
- total length
- 4,128,732 bp
- max length
- 580,176 bp
- mean length
- 87,846 bp
- N50
- 217,355
- L50
- 7
- N90
- 69,439
- L90
- 21
- N95
- 43,062
- L95
- 24
- %GC
- 35.73
- Ns
- 96
- gaps
- 1
- loci tagged
- 1,596
Assembly checks
| Check | Status | Warn/fail reason |
|---|---|---|
| Number of contigs | ||
| Assembly size | ||
| Minimum N50 | ||
| %GC |
Schemes and loci
Navigate and select schemes within tree to display allele designations
Tools
Export:
Analysis: