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Full information on isolate HA026_1 (id:1766)

Provenance/primary metadata

id
1766
isolate
HA026_1
isolation year
2023
country
China
source type
Food
phylogroup
B1
sender
Hy Wang, YZU
curator
Tagger Auto
update history
2 updates show details
date entered
2024-03-28
datestamp
2024-03-28

Sequence bin

contigs
183
total length
4,996,318 bp
max length
281,144 bp
mean length
27,303 bp
N50
112,619
L50
15
N90
29,921
L90
48
N95
14,486
L95
60
%GC
50.58
Ns
682
gaps
7
loci tagged
8

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Escherichia coli Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli 100%

Analysis performed: 2024-04-05

Schemes and loci

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