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Full information on isolate AMA004548 (id:1765)

Provenance/primary metadata

id
1765
isolate
AMA004548
isolation year
2022
country
Denmark
source type
Human
phylogroup
Unknown
sender
Frank Hansen, Statens Serum Institut
curator
Tagger Auto
update history
3 updates show details
date entered
2024-03-26
datestamp
2024-03-26

Sequence bin

contigs
489
total length
5,309,086 bp
max length
82,186 bp
mean length
10,858 bp
N50
23,951
L50
66
N90
6,407
L90
236
N95
3,729
L95
289
%GC
50.56
Ns
0
gaps
0
loci tagged
8

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Escherichia coli Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli 100%

Analysis performed: 2024-04-05

Schemes and loci

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