Full information on isolate Escherichia coli B7 (id:1763)
Provenance/primary metadata
- id
- 1763
- isolate
- Escherichia coli B7
- isolation year
- 2020.12.3
- country
- China
- source type
- Wild Animal
- host
- Panthera pardus japonensis
- origin
- faeces
- phylogroup
- D
- O type
- O9/O158
- H type
- H18
- sender
- Hongjia Li, Northeast Forestry University
- curator
- Tagger Auto
- update history
- 3 updates show details
- date entered
- 2024-03-06
- datestamp
- 2024-03-06
Sequence bin
- contigs
- 85
- total length
- 5,240,875 bp
- max length
- 687,149 bp
- mean length
- 61,658 bp
- N50
- 349,310
- L50
- 6
- N90
- 97,553
- L90
- 14
- N95
- 40,289
- L95
- 19
- %GC
- 50.45
- Ns
- 710
- gaps
- 8
- loci tagged
- 8
Assembly checks
Check | Status | Warn/fail reason |
---|---|---|
Number of contigs | ||
Assembly size | ||
Minimum N50 | ||
%GC |
Schemes and loci
Navigate and select schemes within tree to display allele designations
Tools
Export:
Analysis: