Full information on isolate Escherichia coli B7 (id:1763)

Provenance/primary metadata

id
1763
isolate
Escherichia coli B7
isolation year
2020.12.3
country
China
source type
Wild Animal
host
Panthera pardus japonensis
origin
faeces
phylogroup
D
O type
O9/O158
H type
H18
sender
Hongjia Li, Northeast Forestry University
curator
Tagger Auto
update history
3 updates show details
date entered
2024-03-06
datestamp
2024-03-06

Sequence bin

contigs
85
total length
5,240,875 bp
max length
687,149 bp
mean length
61,658 bp
N50
349,310
L50
6
N90
97,553
L90
14
N95
40,289
L95
19
%GC
50.45
Ns
710
gaps
8
loci tagged
8

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Escherichia coli Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli 100%

Analysis performed: 2024-04-05

Schemes and loci

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