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Full information on isolate YZ196_1 (id:1757)

Provenance/primary metadata

id
1757
isolate
YZ196_1
isolation year
2023
country
China
source type
Food
phylogroup
A
sender
Hy Wang, YZU
curator
Tagger Auto
update history
3 updates show details
date entered
2024-03-06
datestamp
2024-03-06

Sequence bin

contigs
243
total length
4,825,648 bp
max length
290,876 bp
mean length
19,859 bp
N50
81,267
L50
17
N90
21,358
L90
59
N95
10,641
L95
74
%GC
50.64
Ns
1555
gaps
16
loci tagged
8

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Escherichia coli Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli 100%

Analysis performed: 2024-04-05

Schemes and loci

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