Home About Us Contact What's New
Home>Organism>Escherichia coli Pasteur MLST>Isolate info>Sequence bin
Help

Sequence bin for E.coli 807

Contig summary statistics

Contigs
143
Total length
5,002,001
Minimum length
300
Maximum length
324,785
Mean length
34,980
N50
88,872
L50
18
N90
27,322
L90
56
N95
12,508
L95
69

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
200825IlluminaNODE_1_covk_13.609824_covr_61.605_cutoff_33324785uidA (uidA) 4124641845 ← EMBL GBK
pabB (pabB) 241573242040 →
200858 Illumina NODE_2_covk_13.489190_covr_61.341_cutoff_33 238660
200797 Illumina NODE_3_covk_13.248655_covr_59.529_cutoff_33 181103
200787IlluminaNODE_4_covk_13.529713_covr_60.258_cutoff_33151165icdA (icdA) 1369014205 → EMBL GBK
trpA (trpA) 117861118421 ←
trpB (trpB) 118601119194 ←
200822 Illumina NODE_5_covk_13.428807_covr_61.742_cutoff_33 150312
200849IlluminaNODE_6_covk_13.504705_covr_61.421_cutoff_33148778putP (putP) 134708135163 → EMBL GBK
200758 Illumina NODE_7_covk_13.609640_covr_61.120_cutoff_33 147521
200828 Illumina NODE_8_covk_13.660559_covr_62.031_cutoff_33 144918
200769IlluminaNODE_9_covk_13.472907_covr_61.189_cutoff_33141062polB (polB) 9008790536 → EMBL GBK
200768 Illumina NODE_10_covk_13.423400_covr_61.119_cutoff_33 138581
200747 Illumina NODE_11_covk_13.616443_covr_61.926_cutoff_33 137514
200784 Illumina NODE_12_covk_13.577951_covr_61.274_cutoff_33 119235
200845 Illumina NODE_13_covk_13.708672_covr_62.374_cutoff_33 95093
200759 Illumina NODE_14_covk_13.632106_covr_61.876_cutoff_33 94159
200746 Illumina NODE_15_covk_13.503314_covr_60.469_cutoff_33 92302
200799 Illumina NODE_16_covk_13.431028_covr_60.718_cutoff_33 90658
200788 Illumina NODE_17_covk_13.524837_covr_61.716_cutoff_33 89042
200833 Illumina NODE_18_covk_13.395342_covr_60.524_cutoff_33 88872
200762 Illumina NODE_19_covk_13.023608_covr_55.929_cutoff_33 88820
200834 Illumina NODE_20_covk_13.456041_covr_61.914_cutoff_33 88578
200777 Illumina NODE_21_covk_13.597481_covr_62.434_cutoff_33 87933
200786 Illumina NODE_22_covk_13.558046_covr_62.142_cutoff_33 79455
200852 Illumina NODE_23_covk_13.759864_covr_61.915_cutoff_33 77702
200718 Illumina NODE_24_covk_13.321791_covr_60.094_cutoff_33 75148
200760 Illumina NODE_25_covk_13.527032_covr_62.022_cutoff_33 69521
200730 Illumina NODE_26_covk_13.721447_covr_61.491_cutoff_33 68108
200827 Illumina NODE_27_covk_13.652891_covr_60.599_cutoff_33 62525
200731 Illumina NODE_28_covk_13.630707_covr_61.320_cutoff_33 57918
200848 Illumina NODE_29_covk_13.124894_covr_60.087_cutoff_33 57802
200813 Illumina NODE_30_covk_13.303768_covr_59.930_cutoff_33 57306
200806 Illumina NODE_31_covk_13.671003_covr_62.049_cutoff_33 55085
200783 Illumina NODE_32_covk_13.666636_covr_61.819_cutoff_33 54956
200795 Illumina NODE_33_covk_13.526015_covr_60.809_cutoff_33 54359
200763 Illumina NODE_34_covk_13.412161_covr_61.650_cutoff_33 53537
200723 Illumina NODE_35_covk_13.254414_covr_59.979_cutoff_33 53129
200774 Illumina NODE_36_covk_13.491782_covr_59.291_cutoff_33 52144
200801 Illumina NODE_37_covk_13.243367_covr_58.547_cutoff_33 51685
200844 Illumina NODE_38_covk_13.820157_covr_61.486_cutoff_33 49264
200753 Illumina NODE_39_covk_13.512704_covr_61.597_cutoff_33 46249
200773 Illumina NODE_40_covk_13.681556_covr_60.771_cutoff_33 44248
200811 Illumina NODE_41_covk_13.373975_covr_60.512_cutoff_33 43648
200814 Illumina NODE_42_covk_13.443225_covr_61.312_cutoff_33 42675
200735 Illumina NODE_43_covk_13.609227_covr_61.008_cutoff_33 41411
200800 Illumina NODE_44_covk_13.082982_covr_58.342_cutoff_33 39949
200720 Illumina NODE_45_covk_13.353496_covr_62.020_cutoff_33 36806
200829 Illumina NODE_46_covk_13.569485_covr_61.721_cutoff_33 36726
200751 Illumina NODE_47_covk_13.534044_covr_61.319_cutoff_33 35766
200726 Illumina NODE_48_covk_13.576343_covr_60.878_cutoff_33 34800
200728 Illumina NODE_49_covk_13.554615_covr_60.432_cutoff_33 33656
200767 Illumina NODE_50_covk_13.446734_covr_62.466_cutoff_33 31135
200807 Illumina NODE_51_covk_13.068950_covr_59.381_cutoff_33 31042
200755IlluminaNODE_52_covk_12.878065_covr_56.505_cutoff_3330137dinB (dinB) 1744017889 ← EMBL GBK
200812 Illumina NODE_53_covk_13.643872_covr_59.824_cutoff_33 29060
200739 Illumina NODE_54_covk_13.434240_covr_60.907_cutoff_33 28976
200724 Illumina NODE_55_covk_13.651285_covr_61.962_cutoff_33 28792
200748 Illumina NODE_56_covk_12.985956_covr_58.028_cutoff_33 27322
200756 Illumina NODE_57_covk_13.481902_covr_62.025_cutoff_33 27168
200796 Illumina NODE_58_covk_12.899209_covr_56.382_cutoff_33 27167
200772 Illumina NODE_59_covk_13.092514_covr_59.024_cutoff_33 24647
200737 Illumina NODE_60_covk_12.802208_covr_57.849_cutoff_33 20410
200816 Illumina NODE_61_covk_12.827462_covr_57.848_cutoff_33 19537
200819 Illumina NODE_62_covk_13.654709_covr_61.359_cutoff_33 18743
200776 Illumina NODE_63_covk_12.724177_covr_55.326_cutoff_33 17654
200754 Illumina NODE_64_covk_11.943379_covr_51.997_cutoff_33 17641
200778 Illumina NODE_65_covk_12.609652_covr_53.959_cutoff_33 17175
200841 Illumina NODE_66_covk_13.422288_covr_58.775_cutoff_33 15762
200854 Illumina NODE_67_covk_13.219528_covr_62.361_cutoff_33 13814
200717 Illumina NODE_68_covk_12.842118_covr_48.872_cutoff_33 12985
200808 Illumina NODE_69_covk_12.969080_covr_55.904_cutoff_33 12508
200810 Illumina NODE_70_covk_12.921227_covr_59.038_cutoff_33 12346
200859 Illumina NODE_71_covk_13.149701_covr_56.423_cutoff_33 11330
200842 Illumina NODE_72_covk_12.513300_covr_56.095_cutoff_33 10121
200743 Illumina NODE_73_covk_13.502931_covr_60.212_cutoff_33 9844
200771 Illumina NODE_74_covk_13.329274_covr_59.712_cutoff_33 9481
200782 Illumina NODE_75_covk_13.588732_covr_59.586_cutoff_33 9244
200734 Illumina NODE_76_covk_12.408719_covr_46.090_cutoff_33 8310
200727 Illumina NODE_77_covk_12.974241_covr_56.574_cutoff_33 8157
200802 Illumina NODE_78_covk_13.492385_covr_57.758_cutoff_33 8066
200836 Illumina NODE_79_covk_13.591855_covr_62.332_cutoff_33 7954
200738 Illumina NODE_80_covk_13.836457_covr_66.493_cutoff_33 7110
200837 Illumina NODE_81_covk_8.548846_covr_32.637_cutoff_33 6795
200719 Illumina NODE_82_covk_12.976362_covr_54.516_cutoff_33 6636
200757 Illumina NODE_83_covk_12.406574_covr_52.677_cutoff_33 6206
200804 Illumina NODE_84_covk_12.446687_covr_52.722_cutoff_33 6067
200830 Illumina NODE_85_covk_13.025695_covr_59.194_cutoff_33 5803
200856 Illumina NODE_86_covk_12.367084_covr_52.579_cutoff_33 5553
200839 Illumina NODE_87_covk_13.654388_covr_56.287_cutoff_33 5442
200721 Illumina NODE_88_covk_13.474664_covr_62.088_cutoff_33 5331
200750 Illumina NODE_89_covk_13.625895_covr_64.859_cutoff_33 5288
200729 Illumina NODE_90_covk_13.789951_covr_60.938_cutoff_33 4977
200780 Illumina NODE_91_covk_12.330947_covr_56.773_cutoff_33 4871
200818 Illumina NODE_92_covk_14.043375_covr_60.634_cutoff_33 4755
200847 Illumina NODE_93_covk_11.522128_covr_61.876_cutoff_33 4595
200789 Illumina NODE_94_covk_13.601537_covr_58.918_cutoff_33 4415
200766 Illumina NODE_95_covk_12.969320_covr_57.117_cutoff_33 4065
200817 Illumina NODE_96_covk_13.432294_covr_60.983_cutoff_33 4035
200821 Illumina NODE_97_covk_8.834918_covr_42.738_cutoff_33 3592
200826 Illumina NODE_98_covk_12.997351_covr_59.124_cutoff_33 3518
200722 Illumina NODE_99_covk_8.825024_covr_37.114_cutoff_33 3310
200835 Illumina NODE_100_covk_14.533017_covr_57.393_cutoff_33 3286
200740 Illumina NODE_101_covk_10.623061_covr_43.042_cutoff_33 2957
200733 Illumina NODE_102_covk_12.789161_covr_56.682_cutoff_33 2815
200831 Illumina NODE_103_covk_13.491244_covr_57.126_cutoff_33 2291
200725 Illumina NODE_104_covk_12.817971_covr_63.308_cutoff_33 2280
200815 Illumina NODE_105_covk_13.508881_covr_57.478_cutoff_33 2204
200843 Illumina NODE_106_covk_13.471104_covr_55.260_cutoff_33 2059
200785 Illumina NODE_107_covk_13.022260_covr_51.074_cutoff_33 1873
200749 Illumina NODE_108_covk_13.415434_covr_60.666_cutoff_33 1676
200824 Illumina NODE_109_covk_12.479844_covr_47.536_cutoff_33 1659
200857 Illumina NODE_110_covk_13.564297_covr_61.488_cutoff_33 1443
200779 Illumina NODE_111_covk_12.941176_covr_56.296_cutoff_33 1379
200736 Illumina NODE_112_covk_13.787561_covr_62.471_cutoff_33 1359
200846 Illumina NODE_113_covk_13.561375_covr_65.032_cutoff_33 1343
200794 Illumina NODE_114_covk_7.516843_covr_25.787_cutoff_33 1160
200742 Illumina NODE_115_covk_13.627085_covr_62.218_cutoff_33 1140
200840 Illumina NODE_116_covk_14.210021_covr_67.704_cutoff_33 1059
200823 Illumina NODE_117_covk_14.630342_covr_62.735_cutoff_33 1057
200770 Illumina NODE_118_covk_14.309753_covr_63.872_cutoff_33 1054
200732 Illumina NODE_119_covk_13.195876_covr_49.772_cutoff_33 994
200820 Illumina NODE_120_covk_12.638821_covr_56.975_cutoff_33 935
200761 Illumina NODE_121_covk_12.738727_covr_58.099_cutoff_33 875
200832 Illumina NODE_122_covk_12.960110_covr_54.268_cutoff_33 848
200803 Illumina NODE_123_covk_11.829431_covr_43.413_cutoff_33 719
200805 Illumina NODE_124_covk_11.596990_covr_44.047_cutoff_33 719
200853 Illumina NODE_125_covk_15.844595_covr_62.687_cutoff_33 713
200745 Illumina NODE_126_covk_9.021239_covr_30.241_cutoff_33 686
200790 Illumina NODE_127_covk_9.697143_covr_52.885_cutoff_33 646
200781 Illumina NODE_128_covk_10.512552_covr_47.601_cutoff_33 599
200741 Illumina NODE_129_covk_10.634249_covr_31.215_cutoff_33 594
200792 Illumina NODE_130_covk_8.030043_covr_32.748_cutoff_33 587
200855 Illumina NODE_131_covk_14.743304_covr_66.329_cutoff_33 569
200851 Illumina NODE_132_covk_12.601648_covr_40.342_cutoff_33 485
200793 Illumina NODE_133_covk_9.011173_covr_30.507_cutoff_33 479
200765 Illumina NODE_134_covk_1.072886_covr_2.912_cutoff_33 464
200764 Illumina NODE_135_covk_10.746988_covr_32.603_cutoff_33 453
200838 Illumina NODE_136_covk_8.033133_covr_18.519_cutoff_33 453
200744 Illumina NODE_137_covk_11.313665_covr_36.767_cutoff_33 443
200775 Illumina NODE_138_covk_9.083851_covr_35.429_cutoff_33 443
200752 Illumina NODE_139_covk_10.214286_covr_31.481_cutoff_33 401
200798 Illumina NODE_140_covk_8.271357_covr_15.928_cutoff_33 320
200850 Illumina NODE_141_covk_10.818653_covr_7.191_cutoff_33 314
200809 Illumina NODE_142_covk_6.919355_covr_18.961_cutoff_33 307
200791 Illumina NODE_143_covk_8.932961_covr_24.920_cutoff_33 300