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Sequence bin for E.coli 576

Contig summary statistics

Contigs
142
Total length
4,957,775
Minimum length
300
Maximum length
322,919
Mean length
34,914
N50
115,220
L50
14
N90
27,639
L90
51
N95
13,987
L95
64

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
200619 Illumina NODE_1_covk_13.467782_covr_60.217_cutoff_31 322919
200692 Illumina NODE_2_covk_13.521054_covr_59.793_cutoff_31 284692
200708IlluminaNODE_3_covk_13.638122_covr_60.956_cutoff_31203239polB (polB) 159135159584 → EMBL GBK
200602 Illumina NODE_4_covk_13.467547_covr_59.841_cutoff_31 202659
200676 Illumina NODE_5_covk_13.503326_covr_60.375_cutoff_31 184445
200598IlluminaNODE_6_covk_13.575373_covr_60.213_cutoff_31178395putP (putP) 164324164779 → EMBL GBK
200678IlluminaNODE_7_covk_13.359409_covr_58.599_cutoff_31176060icdA (icdA) 100020100535 → EMBL GBK
200647 Illumina NODE_8_covk_13.380609_covr_59.475_cutoff_31 173572
200685IlluminaNODE_9_covk_13.740735_covr_59.719_cutoff_31160582uidA (uidA) 117329117928 → EMBL GBK
200687 Illumina NODE_10_covk_13.477296_covr_60.825_cutoff_31 150600
200605 Illumina NODE_11_covk_13.409226_covr_59.574_cutoff_31 139875
200668 Illumina NODE_12_covk_13.567841_covr_60.881_cutoff_31 125841
200689 Illumina NODE_13_covk_13.541623_covr_59.771_cutoff_31 122444
200626 Illumina NODE_14_covk_13.214754_covr_56.989_cutoff_31 115220
200628 Illumina NODE_15_covk_13.641386_covr_60.703_cutoff_31 98168
200688 Illumina NODE_16_covk_13.561388_covr_60.089_cutoff_31 95686
200606 Illumina NODE_17_covk_13.545205_covr_61.062_cutoff_31 88486
200640IlluminaNODE_18_covk_13.530855_covr_59.901_cutoff_3185375pabB (pabB) 6086661333 ← EMBL GBK
200713 Illumina NODE_19_covk_13.618486_covr_60.328_cutoff_31 82734
200627 Illumina NODE_20_covk_13.623201_covr_60.605_cutoff_31 82064
200584 Illumina NODE_21_covk_13.399084_covr_59.368_cutoff_31 79791
200639 Illumina NODE_22_covk_13.390369_covr_59.376_cutoff_31 70480
200664 Illumina NODE_23_covk_13.804786_covr_60.711_cutoff_31 69496
200696 Illumina NODE_24_covk_13.744997_covr_61.049_cutoff_31 66987
200715 Illumina NODE_25_covk_13.573086_covr_60.086_cutoff_31 65804
200633 Illumina NODE_26_covk_13.404283_covr_58.967_cutoff_31 62325
200613 Illumina NODE_27_covk_13.675734_covr_60.393_cutoff_31 59970
200663 Illumina NODE_28_covk_13.562892_covr_59.212_cutoff_31 58507
200662 Illumina NODE_29_covk_13.256624_covr_58.709_cutoff_31 57754
200666 Illumina NODE_30_covk_13.583591_covr_61.048_cutoff_31 52920
200709IlluminaNODE_31_covk_13.578306_covr_59.176_cutoff_3146963trpA (trpA) 2829228852 ← EMBL GBK
trpB (trpB) 2903229625 ←
200581 Illumina NODE_32_covk_13.746305_covr_60.586_cutoff_31 45250
200648 Illumina NODE_33_covk_12.222549_covr_52.659_cutoff_31 42579
200675 Illumina NODE_34_covk_13.272106_covr_57.809_cutoff_31 41998
200693 Illumina NODE_35_covk_10.028789_covr_42.568_cutoff_31 41839
200650 Illumina NODE_36_covk_13.383605_covr_58.158_cutoff_31 41768
200710 Illumina NODE_37_covk_12.705124_covr_53.722_cutoff_31 41006
200592 Illumina NODE_38_covk_13.829300_covr_59.491_cutoff_31 40695
200660 Illumina NODE_39_covk_13.310715_covr_58.106_cutoff_31 37834
200607 Illumina NODE_40_covk_13.496660_covr_59.713_cutoff_31 36951
200603 Illumina NODE_41_covk_13.759357_covr_58.779_cutoff_31 35896
200638 Illumina NODE_42_covk_13.312071_covr_59.931_cutoff_31 31617
200672 Illumina NODE_43_covk_13.719226_covr_61.808_cutoff_31 30975
200588 Illumina NODE_44_covk_13.196313_covr_59.129_cutoff_31 30277
200625 Illumina NODE_45_covk_13.526733_covr_61.046_cutoff_31 29523
200637 Illumina NODE_46_covk_13.231765_covr_57.187_cutoff_31 29323
200585 Illumina NODE_47_covk_13.251638_covr_57.936_cutoff_31 28654
200580 Illumina NODE_48_covk_12.914101_covr_55.301_cutoff_31 28643
200683 Illumina NODE_49_covk_13.205471_covr_56.410_cutoff_31 27760
200656 Illumina NODE_50_covk_13.469012_covr_59.638_cutoff_31 27745
200579IlluminaNODE_51_covk_13.412021_covr_59.159_cutoff_3127639dinB (dinB) 1496715416 ← EMBL GBK
200712 Illumina NODE_52_covk_12.296974_covr_52.411_cutoff_31 26790
200611 Illumina NODE_53_covk_13.021873_covr_54.861_cutoff_31 25037
200703 Illumina NODE_54_covk_11.452236_covr_48.950_cutoff_31 24407
200698 Illumina NODE_55_covk_13.427956_covr_58.250_cutoff_31 23579
200586 Illumina NODE_56_covk_11.700370_covr_49.996_cutoff_31 21187
200655 Illumina NODE_57_covk_13.339305_covr_57.510_cutoff_31 18933
200643 Illumina NODE_58_covk_13.016648_covr_57.508_cutoff_31 18141
200591 Illumina NODE_59_covk_12.212087_covr_52.323_cutoff_31 17859
200594 Illumina NODE_60_covk_10.678036_covr_46.305_cutoff_31 17477
200610 Illumina NODE_61_covk_10.090993_covr_43.939_cutoff_31 16441
200674 Illumina NODE_62_covk_12.154972_covr_50.738_cutoff_31 15698
200657 Illumina NODE_63_covk_13.585603_covr_60.684_cutoff_31 15208
200680 Illumina NODE_64_covk_13.561445_covr_58.829_cutoff_31 13987
200635 Illumina NODE_65_covk_12.460661_covr_52.048_cutoff_31 13708
200622 Illumina NODE_66_covk_12.045160_covr_46.347_cutoff_31 13075
200661 Illumina NODE_67_covk_12.521975_covr_49.978_cutoff_31 12089
200679 Illumina NODE_68_covk_11.980995_covr_51.758_cutoff_31 11539
200597 Illumina NODE_69_covk_9.588969_covr_37.754_cutoff_31 11507
200636 Illumina NODE_70_covk_13.564624_covr_60.033_cutoff_31 11185
200667 Illumina NODE_71_covk_9.627458_covr_36.834_cutoff_31 11105
200690 Illumina NODE_72_covk_13.445413_covr_58.930_cutoff_31 10215
200601 Illumina NODE_73_covk_11.367119_covr_48.072_cutoff_31 9859
200631 Illumina NODE_74_covk_13.639446_covr_58.224_cutoff_31 9440
200593 Illumina NODE_75_covk_9.006667_covr_36.063_cutoff_31 8970
200694 Illumina NODE_76_covk_13.865329_covr_57.043_cutoff_31 6299
200576 Illumina NODE_77_covk_11.052838_covr_49.731_cutoff_31 6234
200671 Illumina NODE_78_covk_11.734954_covr_55.584_cutoff_31 5920
200686 Illumina NODE_79_covk_11.186480_covr_49.877_cutoff_31 5328
200596 Illumina NODE_80_covk_11.725357_covr_61.310_cutoff_31 4676
200652 Illumina NODE_81_covk_10.539881_covr_42.438_cutoff_31 4672
200604 Illumina NODE_82_covk_13.457451_covr_57.352_cutoff_31 4657
200682 Illumina NODE_83_covk_13.364928_covr_57.266_cutoff_31 4415
200670 Illumina NODE_84_covk_12.372257_covr_56.552_cutoff_31 4223
200587 Illumina NODE_85_covk_11.331333_covr_45.414_cutoff_31 4120
200677 Illumina NODE_86_covk_8.726619_covr_35.839_cutoff_31 3040
200616 Illumina NODE_87_covk_12.564155_covr_53.576_cutoff_31 3028
200621 Illumina NODE_88_covk_13.357664_covr_56.416_cutoff_31 2587
200623 Illumina NODE_89_covk_12.826016_covr_61.141_cutoff_31 2581
200701 Illumina NODE_90_covk_11.318070_covr_46.014_cutoff_31 2567
200634 Illumina NODE_91_covk_13.647181_covr_60.460_cutoff_31 2533
200599 Illumina NODE_92_covk_12.004880_covr_46.474_cutoff_31 2375
200669 Illumina NODE_93_covk_9.553571_covr_41.177_cutoff_31 2231
200705 Illumina NODE_94_covk_13.876850_covr_55.940_cutoff_31 2216
200615 Illumina NODE_95_covk_13.146475_covr_61.299_cutoff_31 2135
200706 Illumina NODE_96_covk_12.549899_covr_54.839_cutoff_31 2105
200645 Illumina NODE_97_covk_13.369771_covr_61.637_cutoff_31 1914
200658 Illumina NODE_98_covk_8.553143_covr_40.275_cutoff_31 1871
200590 Illumina NODE_99_covk_8.095963_covr_30.216_cutoff_31 1830
200691 Illumina NODE_100_covk_11.110207_covr_46.998_cutoff_31 1718
200589 Illumina NODE_101_covk_9.173258_covr_35.702_cutoff_31 1714
200704 Illumina NODE_102_covk_13.921159_covr_64.186_cutoff_31 1605
200617 Illumina NODE_103_covk_12.402748_covr_43.787_cutoff_31 1504
200707 Illumina NODE_104_covk_9.625418_covr_43.098_cutoff_31 1374
200612 Illumina NODE_105_covk_12.641791_covr_48.630_cutoff_31 1260
200609 Illumina NODE_106_covk_14.143360_covr_63.999_cutoff_31 1258
200699 Illumina NODE_107_covk_13.899648_covr_60.395_cutoff_31 1257
200630 Illumina NODE_108_covk_8.884085_covr_25.637_cutoff_31 1208
200711 Illumina NODE_109_covk_6.896054_covr_24.015_cutoff_31 1160
200646 Illumina NODE_110_covk_11.888027_covr_53.713_cutoff_31 1023
200624 Illumina NODE_111_covk_13.873134_covr_58.442_cutoff_31 925
200714 Illumina NODE_112_covk_12.085000_covr_48.933_cutoff_31 921
200695 Illumina NODE_113_covk_11.467419_covr_45.541_cutoff_31 919
200681 Illumina NODE_114_covk_11.893041_covr_51.940_cutoff_31 897
200632 Illumina NODE_115_covk_13.861757_covr_59.515_cutoff_31 895
200642 Illumina NODE_116_covk_13.705416_covr_62.648_cutoff_31 878
200649 Illumina NODE_117_covk_16.190265_covr_69.551_cutoff_31 799
200697 Illumina NODE_118_covk_11.771982_covr_50.770_cutoff_31 792
200629 Illumina NODE_119_covk_14.873282_covr_62.366_cutoff_31 776
200620 Illumina NODE_120_covk_12.211409_covr_42.614_cutoff_31 717
200653 Illumina NODE_121_covk_10.676636_covr_47.439_cutoff_31 656
200575 Illumina NODE_122_covk_11.354049_covr_46.748_cutoff_31 652
200582 Illumina NODE_123_covk_13.544592_covr_51.225_cutoff_31 648
200618 Illumina NODE_124_covk_12.780242_covr_42.175_cutoff_31 617
200651 Illumina NODE_125_covk_7.360324_covr_30.135_cutoff_31 615
200641 Illumina NODE_126_covk_7.389121_covr_30.649_cutoff_31 599
200600 Illumina NODE_127_covk_11.866521_covr_36.870_cutoff_31 578
200654 Illumina NODE_128_covk_10.214602_covr_30.033_cutoff_31 573
200608 Illumina NODE_129_covk_13.113839_covr_46.731_cutoff_31 569
200684 Illumina NODE_130_covk_7.833708_covr_26.027_cutoff_31 566
200700 Illumina NODE_131_covk_7.875289_covr_33.126_cutoff_31 554
200702 Illumina NODE_132_covk_15.917453_covr_63.433_cutoff_31 545
200583 Illumina NODE_133_covk_6.798680_covr_32.491_cutoff_31 485
200577 Illumina NODE_134_covk_2.461326_covr_5.406_cutoff_31 483
200659 Illumina NODE_135_covk_16.259777_covr_47.000_cutoff_31 479
200716 Illumina NODE_136_covk_9.183381_covr_17.468_cutoff_31 470
200578 Illumina NODE_137_covk_37.739274_covr_149.361_cutoff_31 424
200614 Illumina NODE_138_covk_63.137405_covr_220.097_cutoff_31 383
200644 Illumina NODE_139_covk_12.221198_covr_40.737_cutoff_31 338
200595 Illumina NODE_140_covk_6.666667_covr_32.168_cutoff_31 316
200665 Illumina NODE_141_covk_14.887097_covr_44.179_cutoff_31 307
200673 Illumina NODE_142_covk_7.424581_covr_8.747_cutoff_31 300