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Sequence bin for E.coli 94

Contig summary statistics

Contigs
179
Total length
4,922,269
Minimum length
313
Maximum length
268,139
Mean length
27,499
N50
113,844
L50
15
N90
19,896
L90
56
N95
10,559
L95
73

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
200520 Illumina NODE_1_covk_21.547747_covr_62.192_cutoff_33 268139
200542 Illumina NODE_2_covk_21.835092_covr_63.007_cutoff_33 239226
200562IlluminaNODE_3_covk_21.630609_covr_62.507_cutoff_33205594polB (polB) 114229114678 ← EMBL GBK
200479IlluminaNODE_4_covk_21.675606_covr_62.459_cutoff_33196545pabB (pabB) 113537114004 ← EMBL GBK
200567IlluminaNODE_5_covk_21.619007_covr_62.367_cutoff_33192533uidA (uidA) 9591296511 ← EMBL GBK
200412IlluminaNODE_6_covk_21.639840_covr_62.462_cutoff_33188951putP (putP) 1359514050 ← EMBL GBK
200431IlluminaNODE_7_covk_21.409906_covr_61.813_cutoff_33157484icdA (icdA) 9820398718 → EMBL GBK
200465 Illumina NODE_8_covk_21.211092_covr_61.355_cutoff_33 155491
200555 Illumina NODE_9_covk_21.659582_covr_62.510_cutoff_33 154383
200568 Illumina NODE_10_covk_21.778788_covr_62.852_cutoff_33 133261
200401 Illumina NODE_11_covk_21.864196_covr_63.162_cutoff_33 129543
200422 Illumina NODE_12_covk_21.944915_covr_63.244_cutoff_33 128719
200516 Illumina NODE_13_covk_21.637402_covr_62.467_cutoff_33 122088
200476 Illumina NODE_14_covk_21.645236_covr_62.540_cutoff_33 114344
200438IlluminaNODE_15_covk_21.224836_covr_61.318_cutoff_33113844trpA (trpA) 9519495754 ← EMBL GBK
trpB (trpB) 9593496527 ←
200445 Illumina NODE_16_covk_21.789143_covr_62.826_cutoff_33 106389
200531 Illumina NODE_17_covk_21.715929_covr_62.580_cutoff_33 104858
200519 Illumina NODE_18_covk_21.554297_covr_62.274_cutoff_33 92360
200494 Illumina NODE_19_covk_21.490364_covr_62.084_cutoff_33 91523
200560IlluminaNODE_20_covk_21.067897_covr_60.991_cutoff_3381679dinB (dinB) 6024960698 ← EMBL GBK
200491 Illumina NODE_21_covk_21.296218_covr_61.582_cutoff_33 77201
200517 Illumina NODE_22_covk_21.398628_covr_62.021_cutoff_33 71953
200501 Illumina NODE_23_covk_21.868104_covr_63.128_cutoff_33 68350
200512 Illumina NODE_24_covk_19.593506_covr_57.068_cutoff_33 66565
200467 Illumina NODE_25_covk_20.653779_covr_59.833_cutoff_33 64604
200453 Illumina NODE_26_covk_21.970575_covr_63.480_cutoff_33 62529
200457 Illumina NODE_27_covk_21.599016_covr_62.069_cutoff_33 62281
200528 Illumina NODE_28_covk_21.556645_covr_62.169_cutoff_33 61066
200502 Illumina NODE_29_covk_21.748558_covr_62.838_cutoff_33 55905
200405 Illumina NODE_30_covk_21.774971_covr_62.752_cutoff_33 55434
200413 Illumina NODE_31_covk_21.395879_covr_61.872_cutoff_33 46444
200533 Illumina NODE_32_covk_21.660752_covr_62.750_cutoff_33 41691
200399 Illumina NODE_33_covk_19.785553_covr_57.341_cutoff_33 41312
200484 Illumina NODE_34_covk_21.900629_covr_63.138_cutoff_33 41147
200402 Illumina NODE_35_covk_21.925888_covr_63.193_cutoff_33 38662
200410 Illumina NODE_36_covk_21.922801_covr_63.085_cutoff_33 36058
200574 Illumina NODE_37_covk_21.464519_covr_61.947_cutoff_33 34836
200454 Illumina NODE_38_covk_19.640393_covr_57.040_cutoff_33 34125
200492 Illumina NODE_39_covk_21.890556_covr_62.953_cutoff_33 33815
200436 Illumina NODE_40_covk_20.832169_covr_60.075_cutoff_33 33585
200499 Illumina NODE_41_covk_21.698078_covr_62.555_cutoff_33 32773
200506 Illumina NODE_42_covk_21.566590_covr_62.101_cutoff_33 32694
200481 Illumina NODE_43_covk_21.878253_covr_63.022_cutoff_33 31221
200527 Illumina NODE_44_covk_20.929074_covr_60.643_cutoff_33 31202
200439 Illumina NODE_45_covk_21.918921_covr_63.175_cutoff_33 31081
200458 Illumina NODE_46_covk_21.067941_covr_60.813_cutoff_33 31008
200522 Illumina NODE_47_covk_20.803331_covr_60.146_cutoff_33 30363
200548 Illumina NODE_48_covk_21.401248_covr_61.675_cutoff_33 30225
200496 Illumina NODE_49_covk_20.389631_covr_59.006_cutoff_33 28685
200446 Illumina NODE_50_covk_22.010861_covr_63.822_cutoff_33 26340
200550 Illumina NODE_51_covk_21.350239_covr_61.330_cutoff_33 24134
200408 Illumina NODE_52_covk_21.650367_covr_62.166_cutoff_33 24067
200480 Illumina NODE_53_covk_20.146227_covr_57.431_cutoff_33 22824
200471 Illumina NODE_54_covk_21.577919_covr_62.043_cutoff_33 21647
200537 Illumina NODE_55_covk_21.495089_covr_61.794_cutoff_33 21378
200414 Illumina NODE_56_covk_9.825075_covr_33.662_cutoff_33 19896
200565 Illumina NODE_57_covk_21.841662_covr_62.548_cutoff_33 18370
200456 Illumina NODE_58_covk_20.886757_covr_60.206_cutoff_33 17451
200497 Illumina NODE_59_covk_21.468078_covr_62.308_cutoff_33 17062
200546 Illumina NODE_60_covk_21.134810_covr_60.599_cutoff_33 16537
200498 Illumina NODE_61_covk_20.924925_covr_60.335_cutoff_33 16496
200557 Illumina NODE_62_covk_20.738540_covr_60.151_cutoff_33 15719
200524 Illumina NODE_63_covk_21.677290_covr_62.356_cutoff_33 15004
200509 Illumina NODE_64_covk_21.959784_covr_62.650_cutoff_33 14944
200429 Illumina NODE_65_covk_20.197650_covr_58.089_cutoff_33 12778
200428 Illumina NODE_66_covk_21.595554_covr_62.057_cutoff_33 12291
200572 Illumina NODE_67_covk_22.226946_covr_63.744_cutoff_33 11648
200483 Illumina NODE_68_covk_21.427717_covr_61.423_cutoff_33 11637
200420 Illumina NODE_69_covk_20.892222_covr_59.911_cutoff_33 11465
200447 Illumina NODE_70_covk_17.886341_covr_51.744_cutoff_33 11176
200544 Illumina NODE_71_covk_10.893709_covr_36.017_cutoff_33 10956
200435 Illumina NODE_72_covk_21.833879_covr_62.423_cutoff_33 10784
200541 Illumina NODE_73_covk_18.001147_covr_52.209_cutoff_33 10559
200540 Illumina NODE_74_covk_21.508158_covr_61.523_cutoff_33 9783
200571 Illumina NODE_75_covk_21.375599_covr_61.040_cutoff_33 9074
200430 Illumina NODE_76_covk_21.737045_covr_62.173_cutoff_33 8899
200523 Illumina NODE_77_covk_18.422891_covr_52.857_cutoff_33 8775
200505 Illumina NODE_78_covk_20.304094_covr_57.962_cutoff_33 8501
200513 Illumina NODE_79_covk_19.708660_covr_56.073_cutoff_33 7870
200409 Illumina NODE_80_covk_12.451067_covr_41.256_cutoff_33 7783
200554 Illumina NODE_81_covk_20.194452_covr_60.438_cutoff_33 7453
200518 Illumina NODE_82_covk_21.685773_covr_61.615_cutoff_33 7339
200433 Illumina NODE_83_covk_20.762846_covr_59.267_cutoff_33 7280
200477 Illumina NODE_84_covk_20.635562_covr_64.099_cutoff_33 7129
200525 Illumina NODE_85_covk_19.554675_covr_56.154_cutoff_33 6281
200443 Illumina NODE_86_covk_19.162823_covr_54.730_cutoff_33 5780
200437 Illumina NODE_87_covk_18.473844_covr_52.977_cutoff_33 5700
200556 Illumina NODE_88_covk_21.102896_covr_60.713_cutoff_33 5036
200482 Illumina NODE_89_covk_21.312435_covr_60.917_cutoff_33 4932
200493 Illumina NODE_90_covk_7.829756_covr_27.415_cutoff_33 4898
200563 Illumina NODE_91_covk_14.156930_covr_44.686_cutoff_33 4738
200411 Illumina NODE_92_covk_21.527391_covr_61.118_cutoff_33 4699
200534 Illumina NODE_93_covk_22.463873_covr_64.269_cutoff_33 4680
200444 Illumina NODE_94_covk_21.072226_covr_59.375_cutoff_33 4668
200558 Illumina NODE_95_covk_21.360253_covr_60.218_cutoff_33 4371
200470 Illumina NODE_96_covk_20.948502_covr_61.390_cutoff_33 3905
200536 Illumina NODE_97_covk_20.530108_covr_58.351_cutoff_33 3819
200515 Illumina NODE_98_covk_22.919885_covr_64.353_cutoff_33 3232
200573 Illumina NODE_99_covk_22.596874_covr_63.366_cutoff_33 3170
200535 Illumina NODE_100_covk_21.531561_covr_59.733_cutoff_33 3109
200495 Illumina NODE_101_covk_19.346245_covr_58.290_cutoff_33 3042
200538 Illumina NODE_102_covk_4.439341_covr_14.305_cutoff_33 2951
200416 Illumina NODE_103_covk_21.255488_covr_59.433_cutoff_33 2741
200561 Illumina NODE_104_covk_20.562901_covr_57.499_cutoff_33 2595
200455 Illumina NODE_105_covk_19.994224_covr_58.075_cutoff_33 2523
200426 Illumina NODE_106_covk_17.659807_covr_49.673_cutoff_33 2383
200472 Illumina NODE_107_covk_4.985667_covr_17.275_cutoff_33 2192
200490 Illumina NODE_108_covk_5.728656_covr_18.974_cutoff_33 2137
200449 Illumina NODE_109_covk_5.186373_covr_18.011_cutoff_33 2095
200529 Illumina NODE_110_covk_22.711278_covr_62.796_cutoff_33 2094
200570 Illumina NODE_111_covk_16.073537_covr_45.458_cutoff_33 2030
200459 Illumina NODE_112_covk_19.005405_covr_53.236_cutoff_33 1949
200547 Illumina NODE_113_covk_23.502541_covr_64.424_cutoff_33 1870
200460 Illumina NODE_114_covk_20.915420_covr_57.806_cutoff_33 1837
200427 Illumina NODE_115_covk_7.149853_covr_24.498_cutoff_33 1794
200397 Illumina NODE_116_covk_18.281835_covr_57.376_cutoff_33 1756
200473 Illumina NODE_117_covk_21.896530_covr_60.054_cutoff_33 1713
200403 Illumina NODE_118_covk_24.147647_covr_67.958_cutoff_33 1650
200489 Illumina NODE_119_covk_16.944134_covr_45.741_cutoff_33 1531
200488 Illumina NODE_120_covk_21.459459_covr_58.677_cutoff_33 1394
200564 Illumina NODE_121_covk_26.139476_covr_69.236_cutoff_33 1282
200423 Illumina NODE_122_covk_21.003425_covr_57.013_cutoff_33 1267
200539 Illumina NODE_123_covk_2.186047_covr_6.913_cutoff_33 1174
200510 Illumina NODE_124_covk_21.545455_covr_62.113_cutoff_33 1133
200451 Illumina NODE_125_covk_24.064220_covr_61.220_cutoff_33 1080
200432 Illumina NODE_126_covk_25.844630_covr_67.262_cutoff_33 1058
200552 Illumina NODE_127_covk_21.083158_covr_54.666_cutoff_33 1049
200407 Illumina NODE_128_covk_4.657082_covr_16.840_cutoff_33 1038
200526 Illumina NODE_129_covk_17.799141_covr_47.796_cutoff_33 1030
200396 Illumina NODE_130_covk_13.326531_covr_34.844_cutoff_33 1030
200462 Illumina NODE_131_covk_16.279523_covr_42.924_cutoff_33 1022
200504 Illumina NODE_132_covk_20.284444_covr_69.086_cutoff_33 999
200566 Illumina NODE_133_covk_5.359777_covr_17.890_cutoff_33 994
200511 Illumina NODE_134_covk_22.301513_covr_59.595_cutoff_33 958
200400 Illumina NODE_135_covk_22.048868_covr_63.222_cutoff_33 938
200553 Illumina NODE_136_covk_15.047619_covr_37.682_cutoff_33 918
200500 Illumina NODE_137_covk_3.257353_covr_9.980_cutoff_33 915
200419 Illumina NODE_138_covk_26.602244_covr_69.978_cutoff_33 901
200424 Illumina NODE_139_covk_18.406210_covr_59.231_cutoff_33 872
200530 Illumina NODE_140_covk_20.442254_covr_52.378_cutoff_33 809
200545 Illumina NODE_141_covk_18.541908_covr_51.807_cutoff_33 791
200441 Illumina NODE_142_covk_18.498408_covr_46.499_cutoff_33 727
200440 Illumina NODE_143_covk_34.863548_covr_90.623_cutoff_33 612
200434 Illumina NODE_144_covk_16.852883_covr_51.164_cutoff_33 602
200461 Illumina NODE_145_covk_19.054878_covr_46.338_cutoff_33 591
200485 Illumina NODE_146_covk_22.795745_covr_51.383_cutoff_33 569
200418 Illumina NODE_147_covk_15.074398_covr_34.576_cutoff_33 556
200486 Illumina NODE_148_covk_17.902613_covr_51.869_cutoff_33 520
200551 Illumina NODE_150_covk_16.961071_covr_47.439_cutoff_33 510
200463 Illumina NODE_149_covk_22.603406_covr_54.447_cutoff_33 510
200448 Illumina NODE_151_covk_24.729064_covr_56.943_cutoff_33 505
200543 Illumina NODE_152_covk_72.360202_covr_199.615_cutoff_33 496
200406 Illumina NODE_153_covk_35.175711_covr_80.743_cutoff_33 486
200415 Illumina NODE_154_covk_30.545220_covr_74.535_cutoff_33 486
200503 Illumina NODE_155_covk_11.447721_covr_21.748_cutoff_33 472
200452 Illumina NODE_156_covk_19.268293_covr_44.658_cutoff_33 468
200469 Illumina NODE_157_covk_18.975342_covr_41.476_cutoff_33 464
200507 Illumina NODE_158_covk_14.810585_covr_31.640_cutoff_33 458
200514 Illumina NODE_159_covk_23.196481_covr_50.520_cutoff_33 440
200549 Illumina NODE_160_covk_10.251534_covr_18.534_cutoff_33 425
200478 Illumina NODE_161_covk_3.144654_covr_8.650_cutoff_33 417
200475 Illumina NODE_162_covk_18.412903_covr_35.653_cutoff_33 409
200468 Illumina NODE_163_covk_19.496753_covr_41.002_cutoff_33 407
200425 Illumina NODE_164_covk_15.788274_covr_19.557_cutoff_33 406
200464 Illumina NODE_165_covk_22.444816_covr_45.352_cutoff_33 398
200404 Illumina NODE_166_covk_8.786207_covr_28.612_cutoff_33 389
200442 Illumina NODE_167_covk_19.072917_covr_37.612_cutoff_33 387
200417 Illumina NODE_168_covk_23.417544_covr_38.401_cutoff_33 384
200559 Illumina NODE_169_covk_22.595745_covr_41.475_cutoff_33 381
200398 Illumina NODE_170_covk_11.307407_covr_16.626_cutoff_33 369
200532 Illumina NODE_171_covk_38.723881_covr_100.681_cutoff_33 367
200421 Illumina NODE_172_covk_14.678295_covr_23.964_cutoff_33 357
200487 Illumina NODE_173_covk_10.468000_covr_25.123_cutoff_33 349
200521 Illumina NODE_174_covk_10.854251_covr_8.558_cutoff_33 346
200450 Illumina NODE_175_covk_18.180328_covr_40.006_cutoff_33 343
200508 Illumina NODE_176_covk_14.743478_covr_29.331_cutoff_33 329
200569 Illumina NODE_177_covk_1.410480_covr_3.238_cutoff_33 328
200474 Illumina NODE_178_covk_16.448430_covr_35.503_cutoff_33 322
200466 Illumina NODE_179_covk_1.495327_covr_4.856_cutoff_33 313