Full information on isolate E.coli 94 (id:2574)
Provenance/primary metadata
- id
- 2574
- isolate
- E.coli 94
- isolation year
- 2022
- country
- Morocco
- source type
- Human
- host
- Human
- clinical condition
- UTI
- origin
- Urine
- phylogroup
- Unknown
- sender
- Aboubakr Khazaz, Institut Pasteur du Maroc
- curator
- Tagger Auto
- update history
- 2 updates show details
- date entered
- 2024-12-03
- datestamp
- 2024-12-03
Sequence bin
- method
- Illumina
- contigs
- 179
- total length
- 4,922,269 bp
- max length
- 268,139 bp
- mean length
- 27,499 bp
- N50
- 113,844
- L50
- 15
- N90
- 19,896
- L90
- 56
- N95
- 10,559
- L95
- 73
- %GC
- 50.87
- Ns
- 500
- gaps
- 5
- loci tagged
- 8
Assembly checks
| Check | Status | Warn/fail reason |
|---|---|---|
| Number of contigs | ||
| Assembly size | ||
| Minimum N50 | ||
| %GC |
Schemes and loci
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