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Full information on isolate YZ116_1 (id:1752)

Provenance/primary metadata

id
1752
isolate
YZ116_1
isolation year
2023
country
China
source type
Food
phylogroup
A
sender
Hy Wang, YZU
curator
Tagger Auto
update history
3 updates show details
date entered
2024-03-06
datestamp
2024-03-06

Sequence bin

method
Illumina
contigs
144
total length
5,042,296 bp
max length
671,685 bp
mean length
35,016 bp
N50
151,739
L50
8
N90
33,221
L90
32
N95
18,853
L95
41
%GC
50.55
Ns
1552
gaps
16
loci tagged
8

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Escherichia coli Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli 100%

Analysis performed: 2024-04-05

Schemes and loci

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