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Full information on isolate YC021_2 (id:1742)

Provenance/primary metadata

id
1742
isolate
YC021_2
isolation year
2023
country
China
source type
Food
phylogroup
A
sender
Hy Wang, YZU
curator
Tagger Auto
update history
3 updates show details
date entered
2024-03-06
datestamp
2024-03-06

Sequence bin

contigs
157
total length
4,939,509 bp
max length
302,424 bp
mean length
31,462 bp
N50
91,204
L50
18
N90
29,658
L90
53
N95
15,301
L95
64
%GC
50.51
Ns
770
gaps
8
loci tagged
8

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Escherichia coli Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli 100%

Analysis performed: 2024-04-05

Schemes and loci

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