Database status
Sequences
- Total
- 319,469
- Last updated
- 2026-09-23
Schemes
Schemes are collections of loci. They may be indexed, in which case they have a primary key field that identifies unique combinations of alleles.
- Typing schemes
- Other schemes
LIN codes
LIN codes are defined for the following schemes:
| Scheme | thresholds | Nickname fields |
|---|---|---|
| cgMLST | 1240;1035;500;55;25;8;4;2;1;0 | Species Lineage Sublineage Clonal group Genetic cluster |
Loci
2472 loci defined.