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152 records returned (1 - 25 displayed). Click the hyperlinks for detailed information.
| Isolate fields | cgMLST | cgMLST_ulcerans | MLST | Ribosomal MLST | tox | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| id | isolate | aliases | duplicate number | species | biovar | tox gene PCR | tox production Elek | country | travel history | host | source | infection or disease | other source info | resistance info | accession number | cgST | cgST | atpA | dnaE | dnaK | fusA | leuA | odhA | rpoB | ST | clonal complex | rST | species | subspecies | TT | prediction |
| 1 | NCTC13129 | ATCC700971 | C. diphtheriae | Gravis | Positive | Positive | UK [England] | Baltic sea | Human | Pharyngeal membrane | pharyngeal diphtheria | NC_002935.2 | 1,169,1428,1512 | 3 | 5 | 6 | 5 | 3 | 3 | 6 | 8 | 1 | toxigenic (diphtheriae) | ||||||||
| 2 | ERR2167138 | Cd_10 | C. diphtheriae | Eritrea | Not documented | Human | wound | PRJEB14914 | 2,1429 | 2 | 1 | 20 | 16 | 3 | 3 | 5 | 83 | ||||||||||||||
| 4 | NCTC11397 | ATCC27010; CIP100721T | C. diphtheriae | Mitis | Negative | USA | Not documented | Human | LN831026.1 | 4 | 8 | 2 | 16 | 1 | 3 | 3 | 12 | 26 | |||||||||||||
| 15 | ERR2173763 | Cd_3 | C. diphtheriae | Somalia | Not documented | Human | wound | PRJEB14914 | 13,1436 | 4 | 46 | 4 | 1 | 5 | 3 | 2 | 473 | 16 | toxigenic (diphtheriae) | ||||||||||||
| 24 | PW8 | ASM25527v1 | C. diphtheriae | Mitis | Positive | Positive | USA | Not documented | Human | Respiratory | Diphtheria | CP003216 | 22,1444 | 14 | 2 | 23 | 4 | 2 | 14 | 2 | 44 | 2 | toxigenic (diphtheriae) | ||||||||
| 25 | B-D-16-78 | ASM190227v1 | C. diphtheriae | Other | Malaysia | Not documented | Human | nasopharyngeal swab | diphtheria | CP018331 | 23 | 22 | 3 | 94 | 2 | 3 | 3 | 3 | 453 | 2 | toxigenic (diphtheriae) | ||||||||||
| 36 | c123 | ASM183292v1 | C. diphtheriae | Unknown | Not documented | Human | throat | GCA_001832925.1 | 32 | 8 | 3 | 8 | 2 | 7 | 3 | 3 | 457 | 2 | toxigenic (diphtheriae) | ||||||||||||
| 43 | CHUV2995 | C. belfantii | Belfanti | Switzerland | Not documented | Human | Broncho-alveolar lavage | tracheo-bronchitis | GCA_900312965.1 | 38 | 6 | 7 | 10 | 12 | 16 | 7 | 10 | 360 | |||||||||||||
| 46 | KL1235 | C. diphtheriae | Mitis | Somalia | Somalia | Human | Wound swab | Wound infection | SAMN10713544 | 40,1455 | 2 | 12 | 125 | 1 | 3 | 3 | 2 | 586 | 8 | toxigenic (diphtheriae) | |||||||||||
| 48 | SRR6816560 | CD47 | C. diphtheriae | Mitis | Australia | Not documented | Human | Cutaneous (penis, circumcision wound) | PRJNA436425 | 42,1457 | 59 | 8 | 53 | 3 | 5 | 13 | |||||||||||||||
| 49 | rz379 | ASM188976v1 | C. diphtheriae | Malaysia | Not documented | Human | throat | diphtheria | GCA_001889765.1 | 43 | 22 | 3 | 94 | 2 | 3 | 3 | 3 | 453 | 2 | toxigenic (diphtheriae) | |||||||||||
| 51 | rz252 | ASM188978v1 | C. diphtheriae | Malaysia | Not documented | Human | throat | diphtheria | GCA_001889785.1 | 45 | 22 | 3 | 94 | 2 | 3 | 3 | 3 | 453 | 2 | toxigenic (diphtheriae) | |||||||||||
| 53 | rz378 | ASM188983v1 | C. diphtheriae | Malaysia | Not documented | Human | throat | diphtheria | GCA_001889835.1 | 47 | 22 | 3 | 94 | 2 | 3 | 3 | 3 | 453 | 2 | toxigenic (diphtheriae) | |||||||||||
| 71 | SRR6816561 | CD46 | C. diphtheriae | Mitis | Australia | Not documented | Human | Cutaneous | PRJNA436425 | 65,1464 | 1 | 16 | 32 | 1 | 87 | 1 | 4 | 687 | |||||||||||||
| 72 | SRR6816562 | CD45 | C. diphtheriae | Mitis | Australia | Not documented | Human | Cutaneous (foot) | PRJNA436425 | 66,1465 | 49 | 4 | 8 | 53 | 3 | 5 | 13 | 729 | |||||||||||||
| 73 | SRR6816563 | CD44 | C. diphtheriae | Gravis | Australia | Not documented | Human | Cutaneous (wound unknown site) | PRJNA436425 | 67,1466 | 32 | 1 | 45 | 45 | 11 | 3 | 3 | 240 | |||||||||||||
| 74 | SRR6816564 | CD43 | C. diphtheriae | Mitis | Australia | Not documented | Human | Cutaneous (site unknown) | PRJNA436425 | 68,1467 | 3 | 4 | 8 | 1 | 18 | 3 | 9 | 498 | |||||||||||||
| 75 | SRR6816565 | CD42 | C. diphtheriae | Mitis | Australia | Not documented | Human | Cutaneous (site unknown) | PRJNA436425 | 69,1468 | 2 | 4 | 4 | 1 | 3 | 3 | 5 | 5 | |||||||||||||
| 76 | SRR6816567 | CD31 | C. diphtheriae | Mitis | Australia | Not documented | Human | Cutaneous (site unknown) | PRJNA436425 | 70,1469 | 13 | 29 | 108 | 64 | 60 | 1 | 65 | 744 | |||||||||||||
| 77 | SRR6816568 | CD1 | C. diphtheriae | Gravis | Australia | Not documented | Human | Respiratory | PRJNA436425 | 71,1470 | 2 | 1 | 33 | 28 | 11 | 2 | 22 | 516 | |||||||||||||
| 78 | SRR6816569 | CD2 | C. diphtheriae | Gravis | Australia | Not documented | Human | Cutaneous (foot) | PRJNA436425 | 72,1471 | 11 | 1 | 20 | 16 | 3 | 3 | 14 | 239 | |||||||||||||
| 79 | SRR6816570 | CD3 | C. diphtheriae | Gravis | Australia | Not documented | Human | Blood | PRJNA436425 | 73,1472 | 4 | 1 | 8 | 1 | 11 | 3 | 6 | 122 | |||||||||||||
| 80 | SRR6816573 | CD6 | C. diphtheriae | Mitis | Australia | Not documented | Human | Cutaneous (leg) | PRJNA436425 | 74,1473 | 1 | 44 | 9 | 1 | 26 | 69 | 4 | 605 | |||||||||||||
| 81 | SRR6816574 | CD7 | C. diphtheriae | Mitis | Australia | Not documented | Human | Cutaneous (site unknown) | PRJNA436425 | 75,1474 | 13 | 2 | 46 | 19 | 60 | 26 | 13 | 730 | |||||||||||||
| 82 | SRR6816575 | CD8 | C. diphtheriae | Gravis | Australia | Not documented | Human | Respiratory | PRJNA436425 | 76,1475 | 3 | 1 | 18 | 4 | 13 | 3 | 5 | 32 | |||||||||||||
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