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50 records returned (1 - 25 displayed). Click the hyperlinks for detailed information.
Isolate fields | cgMLST | cgMLST_ulcerans | MLST | Ribosomal MLST | tox | ||||||||||||||||||||||||||
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id | isolate | aliases | duplicate number | species | biovar | tox gene PCR | tox production Elek | country | travel history | host | source | infection or disease | other source info | resistance info | accession number | cgST | cgST | atpA | dnaE | dnaK | fusA | leuA | odhA | rpoB | ST | clonal complex | rST | species | subspecies | TT | prediction |
2 | ERR2167138 | Cd_10 | C. diphtheriae | Eritrea | Not documented | Human | wound | PRJEB14914 | 2,1429 | 2 | 1 | 20 | 16 | 3 | 3 | 5 | 83 | ||||||||||||||
15 | ERR2173763 | Cd_3 | C. diphtheriae | Somalia | Not documented | Human | wound | PRJEB14914 | 13,1436 | 4 | 46 | 4 | 1 | 5 | 3 | 2 | 473 | 16 | toxigenic (diphtheriae) | ||||||||||||
46 | KL1235 | C. diphtheriae | Mitis | Somalia | Somalia | Human | Wound swab | Wound infection | SAMN10713544 | 40,1455 | 2 | 12 | 125 | 1 | 3 | 3 | 2 | 586 | 8 | toxigenic (diphtheriae) | |||||||||||
358 | YEM0002 | YE-NCPHL-90 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332854 | 342,1672 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | 2 | toxigenic (diphtheriae) | ||||||||||
362 | YEM0008 | YE-NCPHL-513 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332856 | 344,1675 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | 2 | toxigenic (diphtheriae) | ||||||||||
402 | YEM0010 | YE-NCPHL-260 | C. diphtheriae | Mitis | Positive | Positive | Yemen | Not documented | Human | ERR4332894 | 383,1690 | 2 | 2 | 42 | 31 | 11 | 3 | 4 | 100 | 16 | toxigenic (diphtheriae) | ||||||||||
415 | YEM0033 | YE-NCPHL-667 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332863 | 395,1696 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | 2 | toxigenic (diphtheriae) | ||||||||||
452 | YEM0007 | YE-NCPHL-127 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332855 | 431,442,1706,1714 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | 2 | toxigenic (diphtheriae) | ||||||||||
457 | YEM0012 | YE-NCPHL-730 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332857 | 433,1707 | 3 | 1 | 20 | 7 | 13 | 54 | 2 | 724 | 2 | toxigenic (diphtheriae) | ||||||||||
458 | YEM0014 | YE-NCPHL-446 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332858 | 434,1708,1761 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | ||||||||||||
467 | YEM0019 | YE-NCPHL-434 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332859 | 442,1714 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | 2 | toxigenic (diphtheriae) | ||||||||||
471 | YEM0026 | YE-NCPHL-50 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332860 | 446,1718 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | 2 | toxigenic (diphtheriae) | ||||||||||
486 | YEM0029 | YE-NCPHL-448 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332861 | 690,1730 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | 2 | toxigenic (diphtheriae) | ||||||||||
502 | YEM0030 | YE-NCPHL-117 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332862 | 472,1741 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | 2 | toxigenic (diphtheriae) | ||||||||||
505 | YEM0034 | YE-NCPHL-456 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332864 | 475,1743 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | 2 | toxigenic (diphtheriae) | ||||||||||
506 | YEM0035 | YE-NCPHL-213 | C. diphtheriae | Mitis | Negative | Yemen | Not documented | Human | ERR4332890 | 476,1744 | 2 | 9 | 96 | 2 | 3 | 3 | 4 | 725 | |||||||||||||
524 | YEM0036 | YE-NCPHL-383 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332865 | 494,1755 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | 2 | toxigenic (diphtheriae) | ||||||||||
532 | YEM0037 | YE-NCPHL-447 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332866 | 434,1761 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | 2 | toxigenic (diphtheriae) | ||||||||||
537 | YEM0039 | YE-NCPHL-310 | C. diphtheriae | Gravis | Negative | Yemen | Not documented | Human | ERR4332883 | 506,1764 | 2 | 1 | 20 | 16 | 3 | 3 | 5 | 83 | |||||||||||||
539 | YEM0040 | YE-NCPHL-200 | C. diphtheriae | Mitis | Positive | Positive | Yemen | Not documented | Human | ERR4332885 | 508,1766 | 4 | 46 | 4 | 1 | 3 | 3 | 2 | 447 | 16 | toxigenic (diphtheriae) | ||||||||||
699 | ERR2173767 | Cd_9 | C. diphtheriae | Somalia | Not documented | Human | wound | PRJEB14914 | 580,1818 | 4 | 46 | 4 | 1 | 5 | 3 | 2 | 473 | 16 | toxigenic (diphtheriae) | ||||||||||||
707 | ERR2173855 | Cd_11 | C. diphtheriae | Somalia | Not documented | Human | wound | PRJEB14914 | 588,1825 | 4 | 46 | 4 | 1 | 5 | 3 | 2 | 473 | 16 | toxigenic (diphtheriae) | ||||||||||||
800 | YEM0043 | YE-NCPHL-262 | C. diphtheriae | Mitis | Positive | Positive | Yemen | Not documented | Human | ERR4332895 | 383,1690 | 2 | 2 | 42 | 31 | 11 | 3 | 4 | 100 | 16 | toxigenic (diphtheriae) | ||||||||||
802 | YEM0044 | YE-NCPHL-563 | C. diphtheriae | Mitis | Positive | Positive | Yemen | Not documented | Human | ERR4332886 | 674,1906 | 4 | 46 | 4 | 1 | 3 | 3 | 2 | 447 | 16 | toxigenic (diphtheriae) | ||||||||||
806 | YEM0045 | YE-NCPHL-712 | C. diphtheriae | Gravis | Positive | Positive | Yemen | Not documented | Human | ERR4332867 | 678,1909 | 3 | 1 | 20 | 2 | 13 | 54 | 2 | 384 | 2 | toxigenic (diphtheriae) |
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