Main projects defined in the Corynebacterium cgMLST database
Restricted view: Note that you are currently restricted to viewing or downloading data that was submitted on or prior to 2024-12-31. Please log in to access the full dataset.
Project id
Short description
Full description
Isolates
Dashboard
Browse
3
yemen2019
Yemen 2017-2020 outbreak
50
5
cgMLST set-up study
Isolates included in the cgMLST study (publicly-available genomes and some isolates from the French NRC)
152
7
ResistanceGenomics
Hennart et al. 247 isolates dataset
247
10
New Caledonia 2015-2019 study
Isolates included in the New Caledonia study (Tessier et al., submitted in 2022)
58
11
SL453 study in 2022
See Arcari et al. Microbial Genomics 2023 (IDs 2315 and 2336 were added after publication)
28
13
Oxford
Isolates from former Oxford database
678
17
2022_EuropeanWideReemergence_collection
Collection of the Hoefer et al. study on a large-scale Corynebacterium diphtheriae outbreak among migrant populations in Europe in 2022
363
30
C. ramonii and C. ulcerans, Canada
Corynebacterium ramonii and C. ulcerans isolates from Canada, Vancouver. Isolates were sequenced with Nanopore R.10.4.1 and genotyped (autotag).
16
36
Corynebacterium_Nanopore_R10
Benchmarking Nanopore R10 sequencing vs Illumina for cgMLST typing
349
45
cgMLST C. ulcerans set-up study
Isolates included in the cgMLST study for C. ulcerans and C. ramonii (publicly-available genomes and some isolates from the French NRC)