Full information on isolate FRC0668 (id:805)

Projects

This isolate is a member of the following projects:

Hennart_diphtOscan_2023_OtherIsolates: Publicly-available genomes and isolates from the French NRC (2018-2021)
French Guiana 2016-2021 study: Isolates included in the French Guiana 2016-2021 study (Gaillet et al., Emerg Inf Dis, 2024, https://pubmed.ncbi.nlm.nih.gov/39043387/)
DelgadoBlas_LINcodes_2025: Dataset of 1,665 isolates of C. diphtheriae, C. belfantii and C. rouxii used for the population structure analysis of C. diphtheriae sensu lato.

id: 805
isolate: FRC0668
species: C. diphtheriae
biovar: Mitis
tox gene PCR: Negative
isolation year: 2018
country: French Guiana
continent: South America
state or locality: French Guiana
travel history: None
host: Human
source: Not documented
infection or disease: Cutaneous diphtheria
sender: Sylvain Brisse
curator: Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history: 16 updates show details
embargo history: show details
date entered: 2019-03-07
datestamp: 2025-04-30

Rank	Taxon	Taxonomy	Support	Matches
SPECIES	Corynebacterium diphtheriae	Actinomycetota > Actinomycetes > Mycobacteriales > Corynebacteriaceae > Corynebacterium > Corynebacterium diphtheriae	100%

Analysis performed: 2025-06-05

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Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification scheme	Underlying scheme	Clustering method	Mismatch threshold	Status	Group	Fields
Sublineage	cgMLST	Single-linkage	500	experimental	138 (2 isolates)	SL: 229
Sublineage	cgMLST	Single-linkage	500	experimental	138 (2 isolates)	SL: 229
Genomic_cluster	cgMLST	Single-linkage	25	experimental	432 (1 isolate)

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