Full information on isolate 20240919_DIFT327 (id:6431)
Provenance/primary metadata
- id
- 6431
- isolate
- 20240919_DIFT327
- alias
- DIFT327
- species
- C. ulcerans
- tox gene PCR
- Positive
- tox production Elek
- Positive
- isolation year
- 2024
- city
- 7890
- country
- Belgium
- continent
- Europe
- state or locality
- Hainaut Province
- travel history
- France
- host
- Human
- source
- Skin lesion
- infection or disease
- Lower limb lesion
- other source info
- Diabetic
- epidemic cluster
- /
- sender
- Helena Martini
- curator
- Helena Martini, Laboratorium Microbiologie, Universitair Ziekenhuis Brussel, Belgium (E-mail: Helena.Martini@uzbrussel.be)
- update history
- 8 updates show details
- date entered
- 2024-12-19
- datestamp
- 2026-07-09
Sequence bin
- method
- Illumina
- contigs
- 14
- total length
- 2,581,398 bp
- max length
- 469,855 bp
- mean length
- 184,386 bp
- N50
- 273,566
- L50
- 4
- N90
- 150,045
- L90
- 8
- N95
- 135,318
- L95
- 9
- %GC
- 53.33
- Ns
- 0
- gaps
- 0
- loci tagged
- 505
Assembly checks
| Check | Status | Warn/fail reason |
|---|---|---|
| Number of contigs | ||
| Assembly size | ||
| Minimum N50 | ||
| %GC |
Schemes and loci
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