Full information on isolate KL3343 (id:5889)
Provenance/primary metadata
- id
- 5889
- isolate
- KL3343
- species
- C. diphtheriae
- tox gene PCR
- Negative
- isolation year
- 2025
- country
- Germany
- continent
- Europe
- travel history
- Unknown
- host
- human
- sender
- Alexandra Dangel, Bavarian Health and Food Safety Authority (LGL)
- curator
- Virginie Passet, Institut Pasteur (E-mail: virginie.passet@pasteur.fr)
- update history
- 3 updates show details
- date entered
- 2024-07-22
- datestamp
- 2024-07-22
Sequence bin
- contigs
- 71
- total length
- 2,362,611 bp
- max length
- 170,170 bp
- mean length
- 33,277 bp
- N50
- 71,131
- L50
- 12
- N90
- 28,322
- L90
- 32
- N95
- 17,426
- L95
- 37
- %GC
- 53.58
- Ns
- 0
- gaps
- 0
- loci tagged
- 7
Assembly checks
| Check | Status | Warn/fail reason |
|---|---|---|
| Number of contigs | ||
| Assembly size | ||
| Minimum N50 | ||
| %GC |
Schemes and loci
Tools
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