Full information on isolate D142.97G (id:5458)
Provenance/primary metadata
- id
- 5458
- isolate
- D142.97G
- species
- C. diphtheriae
- tox gene PCR
- Negative
- isolation year
- 1997
- city
- Embu
- country
- Brazil
- continent
- South America
- state or locality
- SP
- travel history
- Unknown
- host
- Human
- infection or disease
- Diphtheria
- sender
- Carlos Camargo, Instituto Adolfo Lutz, Brazil
- curator
- Virginie Passet, Institut Pasteur, France (E-mail: virginie.passet@pasteur.fr)
- update history
- 2 updates show details
- date entered
- 2024-04-02
- datestamp
- 2024-04-02
Sequence bin
- method
- Ion Torrent
- contigs
- 63
- total length
- 2,502,078 bp
- max length
- 428,176 bp
- mean length
- 39,716 bp
- N50
- 148,783
- L50
- 4
- N90
- 31,764
- L90
- 19
- N95
- 21,759
- L95
- 23
- %GC
- 53.66
- Ns
- 0
- gaps
- 0
- loci tagged
- 7
Assembly checks
| Check | Status | Warn/fail reason |
|---|---|---|
| Number of contigs | ||
| Assembly size | ||
| Minimum N50 | ||
| %GC |
Schemes and loci
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