Full information on isolate 2019006 (id:2200)
Projects
This isolate is a member of the following project:
- Oxford
- Isolates from former Oxford database
Provenance/primary metadata
- id
- 2200
- isolate
- 2019006
- species
- C. ramonii
- tox gene PCR
- Positive
- tox production Elek
- Positive
- country
- Venezuela
- continent
- South America
- travel history
- Unknown
- host
- Human
- sender
- Laura Herrera-Leon, Instituto de Salud Carlos III
- curator
- Auto Tagger
- update history
- 4 updates show details
- date entered
- 2022-02-07
- datestamp
- 2023-11-16
Sequence bin
- method
- Unknown
- contigs
- 11
- total length
- 2,394,404 bp
- max length
- 782,345 bp
- mean length
- 217,674 bp
- N50
- 435,292
- L50
- 2
- N90
- 282,378
- L90
- 5
- N95
- 88,006
- L95
- 6
- %GC
- 53.37
- Ns
- 0
- gaps
- 0
- loci tagged
- 1,537
Assembly checks
| Check | Status | Warn/fail reason |
|---|---|---|
| Number of contigs | ||
| Assembly size | ||
| Minimum N50 | ||
| %GC |
Schemes and loci
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Tools
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Analysis: