Full information on isolate FRC0295 (id:169)

Projects (3)

This isolate is a member of the following projects:

Hennart et al. 247 isolates dataset

247 isolates

Publicly-available genomes and isolates from the French NRC (2018-2021)

1,250 isolates

Dataset of 1,665 isolates of C. diphtheriae, C. belfantii and C. rouxii used for the population structure analysis of C. diphtheriae sensu lato.

1,665 isolates

id: 169
isolate: FRC0295
species: C. diphtheriae
biovar: Mitis
tox gene PCR: Negative
isolation year: 2015
country: Mayotte
continent: Africa
state or locality: Mayotte
travel history: Not documented
host: Human
source: Not documented
infection or disease: Not documented
accession number: ERS4330906
sender: Melody Dazas, Institut Pasteur
curator: Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history: 1330 updates show details
date entered: 2017-05-02
datestamp: 2025-04-30

Hennart M, Panunzi LG, Rodrigues C, Gaday Q, Baines SL, Barros-Pinkelnig M, Carmi-Leroy A, Dazas M, Wehenkel AM, Didelot X, Toubiana J, Badell E, Brisse S (2020). Population genomics and antimicrobial resistance in Corynebacterium diphtheriae. Genome Med 12:107

Check	Status	Warn/fail reason
Number of contigs
Minimum N50

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Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification scheme	Underlying scheme	Clustering method	Mismatch threshold	Status	Group	Fields
Sublineage	cgMLST	Single-linkage	500	experimental	57 (5 isolates)	SL: 95
Sublineage	cgMLST	Single-linkage	500	experimental	57 (5 isolates)	SL: 95
Genomic_cluster	cgMLST	Single-linkage	25	experimental	124 (1 isolate)

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