Full information on isolate FRC1116 (id:1420)

Projects

This isolate is a member of the following projects:

Hennart_diphtOscan_2023_OtherIsolates: Publicly-available genomes and isolates from the French NRC (2018-2021)
DelgadoBlas_LINcodes_2025: Dataset of 1,665 isolates of C. diphtheriae, C. belfantii and C. rouxii used for the population structure analysis of C. diphtheriae sensu lato.

id: 1420
isolate: FRC1116
species: C. diphtheriae
biovar: Mitis
tox gene PCR: Negative
isolation year: 2021
country: France
continent: Europe
state or locality: Mainland France
travel history: Not documented
host: Human
source: Toe
infection or disease: Toe wound
sender: Virginie Passet, Institut Pasteur, France
curator: Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history: 10 updates show details
embargo history: show details
date entered: 2021-06-01
datestamp: 2025-04-30

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification scheme	Underlying scheme	Clustering method	Mismatch threshold	Status	Group	Fields
Sublineage	cgMLST	Single-linkage	500	experimental	24 (53 isolates)	SL: 5
Genomic_cluster	cgMLST	Single-linkage	25	experimental	150 (17 isolates)
Sublineage	cgMLST	Single-linkage	500	experimental	24 (53 isolates)	SL: 5
Genomic_cluster	cgMLST	Single-linkage	25	experimental	150 (17 isolates)

Navigate and select schemes within tree to display allele designations

Export:

Analysis: