Full information on isolate NCK_SE0031 (id:99)
Provenance/primary metadata
- id
- 99
- isolate
- NCK_SE0031
- isolation year
- 2015
- world region
- Europe
- country
- France
- city
- Paris
- host
- Human
- neonate
- no
- other strain info
- ST5
- source
- Bone
- infection
- Infection
- other infection info
- Bone biospy
- MSSE MRSE
- MRSE
- sender
- Anne Jamet, INSERM
- curator
- Auto Tagger
- update history
- 8 updates show details
- date entered
- 2017-06-09
- datestamp
- 2022-12-22
Sequence bin
- contigs
- 242
- total length
- 2,433,325 bp
- max length
- 123,657 bp
- mean length
- 10,056 bp
- N50
- 39,381
- L50
- 20
- N90
- 11,269
- L90
- 63
- N95
- 5,830
- L95
- 77
- %GC
- 32.16
- Ns
- 0
- gaps
- 0
- loci tagged
- 768
Assembly checks
| Check | Status | Warn/fail reason |
|---|---|---|
| Number of contigs | ||
| Assembly size | ||
| Minimum N50 | ||
| %GC |
Schemes and loci
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