Full information on isolate PC0116 (id:1278)

Projects

This isolate is a member of the following projects:

Hennart_diphtOscan_2023_OtherIsolates: Publicly-available genomes and isolates from the French NRC (2018-2021)
DelgadoBlas_LINcodes_2025: Dataset of 1,665 isolates of C. diphtheriae, C. belfantii and C. rouxii used for the population structure analysis of C. diphtheriae sensu lato.

Guglielmini J, Hennart M, Badell E, Toubiana J, Criscuolo A, Brisse S (2021). Genomic Epidemiology and Strain Taxonomy of Corynebacterium diphtheriae. J Clin Microbiol 59:e0158121
Xiaoli L, Benoliel E, Peng Y, Aneke J, Cassiday PK, Kay M, McKeirnan S, Duchin JS, Kawakami V, Lindquist S, Acosta AM, DeBolt C, Tondella ML, Weigand MR (2020). Genomic epidemiology of nontoxigenic Corynebacterium diphtheriae from King County, Washington State, USA between July 2018 and May 2019. Microb Genom 6:

Rank	Taxon	Taxonomy	Support	Matches
SPECIES	Corynebacterium diphtheriae	Actinomycetota > Actinomycetes > Mycobacteriales > Corynebacteriaceae > Corynebacterium > Corynebacterium diphtheriae	100%

Analysis performed: 2025-03-17

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification scheme	Underlying scheme	Clustering method	Mismatch threshold	Status	Group	Fields
Sublineage	cgMLST	Single-linkage	500	experimental	18 (74 isolates)	SL: 50
Genomic_cluster	cgMLST	Single-linkage	25	experimental	629 (28 isolates)
Sublineage	cgMLST	Single-linkage	500	experimental	18 (74 isolates)	SL: 50
Genomic_cluster	cgMLST	Single-linkage	25	experimental	629 (28 isolates)

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