Full information on isolate FRC0082 (id:118)

Projects

This isolate is a member of the following projects:

cgMLST set-up study: Isolates included in the cgMLST study (Guglielmini et al. J CLin Microbiol 2021 https://pubmed.ncbi.nlm.nih.gov/34524891/)
ResistanceGenomics: Hennart et al. 247 isolates dataset
Hennart_diphtOscan_2023_OtherIsolates: Publicly-available genomes and isolates from the French NRC (2018-2021)
DelgadoBlas_LINcodes_2025: Dataset of 1,665 isolates of C. diphtheriae, C. belfantii and C. rouxii used for the population structure analysis of C. diphtheriae sensu lato.

id: 118
isolate: FRC0082
species: C. diphtheriae
biovar: Mitis
tox gene PCR: Positive
tox production Elek: Positive
isolation year: 2011
country: France
continent: Europe
state or locality: Mainland France
travel history: None
host: Human
source: Not documented
infection or disease: Wound
accession number: ERS4330856
sender: Marina Barros, Institut Pasteur
curator: Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history: 1346 updates show details
date entered: 2017-02-13
datestamp: 2025-04-30
outbreak or sporadic: Sporadic

Guglielmini J, Hennart M, Badell E, Toubiana J, Criscuolo A, Brisse S (2021). Genomic Epidemiology and Strain Taxonomy of Corynebacterium diphtheriae. J Clin Microbiol 59:e0158121
Hennart M, Panunzi LG, Rodrigues C, Gaday Q, Baines SL, Barros-Pinkelnig M, Carmi-Leroy A, Dazas M, Wehenkel AM, Didelot X, Toubiana J, Badell E, Brisse S (2020). Population genomics and antimicrobial resistance in Corynebacterium diphtheriae. Genome Med 12:107

Rank	Taxon	Taxonomy	Support	Matches
SPECIES	Corynebacterium diphtheriae	Actinomycetota > Actinomycetes > Mycobacteriales > Corynebacteriaceae > Corynebacterium > Corynebacterium diphtheriae	100%

Analysis performed: 2025-06-05

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Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification scheme	Underlying scheme	Clustering method	Mismatch threshold	Status	Group	Fields
Sublineage	cgMLST	Single-linkage	500	experimental	68 (28 isolates)	SL: 486
Sublineage	cgMLST	Single-linkage	500	experimental	68 (28 isolates)	SL: 486
Genomic_cluster	cgMLST	Single-linkage	25	experimental	89 (1 isolate)

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