Full information on isolate FRC0061 (id:116)

Projects

This isolate is a member of the following projects:

ResistanceGenomics: Hennart et al. 247 isolates dataset
Hennart_diphtOscan_2023_OtherIsolates: Publicly-available genomes and isolates from the French NRC (2018-2021)
DelgadoBlas_LINcodes_2025: Dataset of 1,665 isolates of C. diphtheriae, C. belfantii and C. rouxii used for the population structure analysis of C. diphtheriae sensu lato.

id: 116
isolate: FRC0061
species: C. diphtheriae
biovar: Mitis
tox gene PCR: Negative
tox production Elek: Negative
isolation year: 2010
country: France
continent: Europe
state or locality: Mainland France
travel history: Kenya
host: Human
source: Cutaneous
infection or disease: Wound
accession number: ERS4330851
sender: Marina Barros, Institut Pasteur
curator: Martin Rethoret-Pasty, Institut Pasteur, Paris, France (E-mail: martin.rethoret-pasty@pasteur.fr)
update history: 1348 updates show details
date entered: 2017-02-13
datestamp: 2026-09-01

Hennart M, Panunzi LG, Rodrigues C, Gaday Q, Baines SL, Barros-Pinkelnig M, Carmi-Leroy A, Dazas M, Wehenkel AM, Didelot X, Toubiana J, Badell E, Brisse S (2020). Population genomics and antimicrobial resistance in Corynebacterium diphtheriae. Genome Med 12:107

Rank	Taxon	Taxonomy	Support	Matches
SPECIES	Corynebacterium diphtheriae	Actinomycetota > Actinomycetes > Mycobacteriales > Corynebacteriaceae > Corynebacterium > Corynebacterium diphtheriae	100%

Analysis performed: 2025-06-05

No similar isolates at any threshold. Show groups Hide groups

Classification scheme	Underlying scheme	Clustering method	Mismatch threshold	Status	Group	Fields
Sublineage	cgMLST	Single-linkage	500	experimental	67 (1 isolate)	SL: 10019
Genomic_cluster	cgMLST	Single-linkage	25	experimental	88 (1 isolate)

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