Full information on isolate NCK_SE0114 (id:734)

Provenance/primary metadata

id
734
isolate
NCK_SE0114
isolation year
2016
world region
Europe
country
France
city
Paris
host
Human
source
blood
infection
infection
other infection info
broviac catheter
sender
Anne Jamet, INSERM
curator
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update history
4 updates show details
date entered
2018-10-31
datestamp
2022-12-22

Sequence bin

contigs
405
total length
2,652,614 bp
max length
209,667 bp
mean length
6,550 bp
N50
97,590
L50
9
N90
19,800
L90
28
N95
1,230
L95
57
%GC
31.97
Ns
196
gaps
2
loci tagged
769

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus epidermidis Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus epidermidis 100%

Analysis performed: 2022-12-27

Schemes and loci

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