Full information on isolate NCK_SE0107 (id:730)
Provenance/primary metadata
- id
- 730
- isolate
- NCK_SE0107
- isolation year
- 2016
- world region
- Europe
- country
- France
- city
- Paris
- host
- Human
- source
- blood
- infection
- infection
- other infection info
- arterial catheter
- sender
- Anne Jamet, INSERM
- curator
- Auto Tagger
- update history
- 4 updates show details
- date entered
- 2018-10-31
- datestamp
- 2022-12-22
Sequence bin
- contigs
- 98
- total length
- 2,586,045 bp
- max length
- 421,923 bp
- mean length
- 26,389 bp
- N50
- 132,438
- L50
- 5
- N90
- 43,861
- L90
- 17
- N95
- 31,938
- L95
- 20
- %GC
- 31.87
- Ns
- 307
- gaps
- 1
- loci tagged
- 767
Assembly checks
| Check | Status | Warn/fail reason |
|---|---|---|
| Number of contigs | ||
| Assembly size | ||
| Minimum N50 | ||
| %GC |
Schemes and loci
Navigate and select schemes within tree to display allele designations
Tools
Export:
Analysis: