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Full information on isolate NCK_SE0106 (id:729)

Provenance/primary metadata

id
729
isolate
NCK_SE0106
isolation year
2016
world region
Europe
country
France
city
Paris
host
Human
source
blood
infection
commensal
other infection info
peripheric
sender
Anne Jamet, INSERM
curator
Auto Tagger
update history
4 updates show details
date entered
2018-10-31
datestamp
2022-12-22

Sequence bin

contigs
160
total length
2,626,706 bp
max length
283,311 bp
mean length
16,417 bp
N50
96,485
L50
9
N90
25,465
L90
27
N95
18,224
L95
33
%GC
31.88
Ns
0
gaps
0
loci tagged
775

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus epidermidis Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus epidermidis 100%

Analysis performed: 2022-12-27

Schemes and loci

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