Full information on isolate NCK_SE0101 (id:726)

Provenance/primary metadata

id
726
isolate
NCK_SE0101
isolation year
2016
world region
Europe
country
France
city
Paris
host
Human
source
blood
infection
commensal
other infection info
peripheral blood
sender
Anne Jamet, INSERM
curator
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update history
5 updates show details
date entered
2018-10-31
datestamp
2022-12-22

Sequence bin

contigs
207
total length
2,555,533 bp
max length
307,789 bp
mean length
12,346 bp
N50
256,449
L50
5
N90
39,298
L90
15
N95
16,470
L95
19
%GC
32.00
Ns
142
gaps
1
loci tagged
766

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus epidermidis Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus epidermidis 100%

Analysis performed: 2022-12-27

Schemes and loci

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