Allele information - D505_15848: 18

Provenance/meta data

locus

D505_15848

allele

18

sequence

ATGAAAAAAC TAATAGCCTC CATTCTTCTT GTTCCGGCTG CATTTTCTGC CCAACAGGTT ATTTCTAAAG ATGCTGAAAT TGCCAATTAT GTCTCACAGG TAAGTACAGA TTCTTTAAAG TCTCATATCA ACAGACTGGT AGGCTTCGGA ACCCGTCATA CCATGAGTTC TGTAACGGAT CCCAAAAGAG GAATCGGTGC TGCCCGAACC TGGGTTCTGA GAAAGTTTAA AGATTATGCC AAAAATACAG ATGGCAGAAT GGAAGTATTT CTACAAAATC AGATAATACC ACCAGACGGT AAAAGGATTG ATAAACCAAC AGATTTAGGA AATCCAGTTG CTATTCTTCG TGGAACAGAT CCCAATGACA AGCGGATTTT TATGATTAGC GGACATCTGG ATTCACGCGT AAGCGATGTA ATGAATTCAA AAGACAATGC TCCGGGAGCC AATGATGACG GCAGCGGTAC AGCAGCTGTA ATAGAAAGTG CCAGAATCCT GAGTAAATCA AAGTTTCCGG CAACTATAAT ATTTGTCGCT TTTTCGGGAG AAGAACAAGG TTTATTGGGA TCTAAAATGA TGGCCGAAAA GGTTAAAAAC GAGAACTGGC AACTGGAAGC CCTTCTGAAT AATGATATGA TTTCTAACAA CCTGACCAGC GAAACCAATC TGATTAATGC ACATCAGTTG AGAGTTTTTT CTGAGGGCTT ACCTCAATAC GAGTTGGATA AAAAAGCTCA GAAAATCAGA AGCCTTGGTT TGGAGAATGA CAGCGATGCC CGACAATTGG CAAGATATAT AAAAGAAACG GGTGAACGCT ATGTAGAAAA TCTACAGGTG AAACTTATAT ACAGAAATGA CAGATTTCTA AGAGGAGGAG ATCATTCTCC CTTTGTAGAA AGAGGCTATT CCGCTGTAAG GCTTACTGAG TACAATGAAA ATTTTGACCA CCAGCATCAG GATATACGCA AAGAAAATGG AAAACAATAT GGAGATTTAC CTGAGTTTAT TGACTTCGAT TACTTCAAAA AGAATGTAGG CGTAAACGTT TCTGTTTTAG CTAATCTGGC GAAATCTCCT TCAAAACCTG AGAATGTAAA AATGGAAGTA AAAGAATTGA CCAATTACAC TTCTCTTTCA TGGGAAAAAC CAAAATATGG TGAAGTAGTC GGGTATTATG TGTTAATGCG TGAAACGGAT TCTCCAATCT GGCAAAAGAA AATTTTCACA AAAGACATGT CTGTAAAATT ACCTTACTCT AAAGACAATT ACTTCTTTGC CATTCAGGCT GTAAACAATT CCGGAAATGA AAGCCTTATC GCTATTCCAG ACATCAAATA A

length

1341

status

WGS: automated extract (BIGSdb)

date entered

2016-03-25

datestamp

2016-03-25

sender

Elise Larsonneur

curator

Elise Larsonneur, Institut Pasteur

flags

atypical contains IS element downstream fusion frameshift internal stop codon no start codon phase variable: off truncated upstream fusion