Allele information - D505_15848: 16

Provenance/meta data

locus

D505_15848

allele

16

sequence

ATGAAAAAAC TAATAGTCTC CATTCTTCTT GTTCCGGCTG TATTTTCTGC CCAACAGGTT ATTTCTAAAG ATGCCGAAAT TGCCAATTAT GTCTCACAGG TAAGTACAGA TTCTTTAAAG TCACATATCA ACAAACTGGT AAGCTTCGGA ACCCGTCATA CCATGAGTTC TGTAACAGAT CCTAAAAGAG GAATCGGTGC TGCCCGAACC TGGGTTCTGA GAAAGTTTAA AGATTATGCC AAAAATACAG ATGGCAGAAT GGAAGCATTC CTACAAAATC AGATAATACA ACCAGACGGT AAAAGGATTG ATAAACCAAC AGATTTAGGA AATCCGGTTG CTATTCTTCG CGGAACAGAT CCCAATGACA AACGGATTTT TATGATTAGC GGGCACCTGG ATTCACGCGT AAGCGATGTT ATGAATTCAA AAGACAATGC TCCGGGGGCC AATGATGATG GCAGCGGTAC AGCAGCTGTA ATAGAAAGTG CCAGAATTCT GAGTAAATCA AAGTTTCCGG CAACTATAAT ATTTGTCGCT TTTTCGGGAG AAGAACAAGG TTTATTGGGA TCTAAAATGA TGGCCGAAAA GGTTAAAAAT GAGAACTGGC AACTGGAAGC TCTTCTGAAT AATGATATGA TTTCTAATAA TCTGACCAGC GAAACCAATC TGATTAATGC ACATCAGTTG AGAGTTTTTT CTGAGGGCTT ACCTCAATAC GAGCTGGATA AAAAAGCTCA GAAAATCAGA AGTCTTGGTT TGGAAAATGA TGGCGATGCC CGACAATTGG CAAGATATAT CAAAGAAACG GGTGAACGCT ATGTAGATAA TCTACAGGTG AAACTTATAT ACAGAAATGA CAGATTTCTA AGAGGGGGTG ATCATTCTCC CTTTGTAGAA AGAGGCTATT CCGCTGTAAG ACTTACTGAA TACAATGAAA ATTTCGACCA TCAGCATCAG GATATCCGCA AGGAAAACGG AAAACAATAC GGAGATTTAC CTGAGTTTAT CGATTTCGAT TACTTCAAAA AGAATGTAGG AGTAAATGTT TCTGTATTGG CCAATCTGGC AAAATCACCC TCAAAACCTG AAAATGTAAA AATGGAAGTA AAAGAACTCA CCAATTATAC TTCTCTTTCC TGGGAGAAAC CTAAATCGGG TGAAGTAACC GGATATTATG TTTTAATGCG TGAGACGGAT TCTCCGGTAT GGCAAAAGAA ATTTTTCACA AAAGAAACAT TTATAAAATT GCCGTATTCT AAAGATAATT GTTTCTTTGC CGTTCAGGCA GTAAATAGCA CTGGTAACGA AAGTCTGATC GTTATTCCTG GTGTAAAATA A

length

1341

status

WGS: automated extract (BIGSdb)

date entered

2016-03-25

datestamp

2016-03-25

sender

Elise Larsonneur

curator

Elise Larsonneur, Institut Pasteur

flags

atypical contains IS element downstream fusion frameshift internal stop codon no start codon phase variable: off truncated upstream fusion