Allele information - D505_15848: 15

Provenance/meta data

locus

D505_15848

allele

15

sequence

ATGAAAAAAC TAATAGTCTC CATTCTTCTT GTTCCGGCTG CATTTTCTGC CCAACAGGTT ATTTCTAAAG ATGCCGAAAT TGTCAATTAT GTCTCACAGG TAAGTACAGA TTCTTTAAAG TCTCACATCA ATAAGCTGGT AGGCTTCGGG ACCCGACACA CTATGAGTTC TGTAACGGAT CCCAAGAGGG GAATCGGCGC TGCCAGAACC TGGGTTCTGA GAAAGTTTAA AGATTATGCT AAGAATACAG ATGGCAGAAT GGAAGTATTT CTACAAAATC AGATAATACA ACCAGACGGT AAAAGAATTG ATAAACCAAC AGATTTGGGA AATCCAGTCG CCATTCTTCG CGGAACAAAT CCCAATGACA AGAGGATTTT TATGATTAGC GGACATCTGG ATTCACGAGT AAGCAATGTA ATGAATGCAA AAGACAATGC TCCGGGAGCT AATGATGATG GCAGCGGTAC AGCAGCAGTA ATAGAAAGTG CAAGAATCCT GAGTAAATCC AAGTTTCCGG CAACTATAAT ATTTGTCGCG TTTTCAGGAG AAGAACAAGG TTTACTAGGA TCCAGGATGA TGGCTGAGAA AGCTAAAAAT GAGAACTGGC AACTGGAAGC TCTTCTGAAT AATGATATGA TTTCTAATAA CCTGACCAGC GAAACCAATC TCATTAATGC ACATCAGTTG AGAGTTTTTT CTGAGGGCCT ACCACAATAT GAGTTGGATA AAAATGCTCA GAAAATCAGA AGCTTTGGCT TGGAAAATGA TGGCGATGCC CGACAATTGG CAAGATATAT CAAAGAAACA GGTGAACGTT ATGTAGATAA CCTGCAGGTA AAACTTATTT ACAGAAACGA CAGATTCCTA AGAGGAGGAG ACCATTCTCC CTTTTTAGAA AGAGGTTTTT CTGCTGTAAG ACTTACAGAA TATAATGAAA ATTTTGACCA TCAGCATCAG GATATCCGCA AAGAAAATGG AAAACAATAT GGAGATTTAC CTGAGTTTAT TGACTTCGAT TACTTCAAAA AGAATGTAGG AGTAAATGTT TCTGTATTAG CCAATCTGGC AAAATCTCCG TCAAAACCTG AGAATGTAAA AATAGAAGTA AAAGAACTCA CCAATTACAC TTCTCTTTCA TGGGAAAAAC CAAAATATGG TGAAGTAGTC GGGTATTATG TGTTAATGCG TGAAACGGAT TCTCCAATCT GGCAAAAGAA AATTTTCACA AAAGACATGT CTGTAAAATT ACCTTACTCT AAAGACAATT ACTTCTTTGC CGTTCAGGCT GTAAATAGTA CTGGTAACGA AAGTCTGATC GTTATTCCTG GTGTGAAATA A

length

1341

status

WGS: automated extract (BIGSdb)

date entered

2016-03-25

datestamp

2016-03-25

sender

Elise Larsonneur

curator

Elise Larsonneur, Institut Pasteur

flags

atypical contains IS element downstream fusion frameshift internal stop codon no start codon phase variable: off truncated upstream fusion