Search or browse database
Modify form parameters
Click to add or remove additional query terms:
Metadata
- Provenance field
- Attribute values list
- Filters
Assembly
- Sequence bin properties
- Assembly checks
Schemes/Loci
- Allele designations/scheme field values
- Allele designation counts
- Allele designation status
- Tagged sequence counts
- Tagged sequence status
5 records returned. Click the hyperlinks for detailed information.
| Isolate fields | cgMLST | cgMLST_ulcerans | MLST | Ribosomal MLST | spuA_island | tox | ||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| id | isolate | aliases | duplicate number | species | biovar | tox gene PCR | tox production Elek | country | travel history | host | source | infection or disease | other source info | resistance info | accession number | cgST | LINcode | Species | Lineage | Sublineage | Clonal group | Genetic cluster | cgST | atpA | dnaE | dnaK | fusA | leuA | odhA | rpoB | ST | clonal complex | rST | species | subspecies | amy (spuA) | TT | prediction |
| 2337 | NML171290-1 | C. diphtheriae | Mitis | Canada | Not documented | Human | Toe wound | PRJNA798684 | 1377 | 0_0_192_1_0_14_0_2_0_0 | C. diphtheriae | 0_0 | SL50 | ClG50 | GC11 | 2 | 2 | 4 | 1 | 3 | 3 | 2 | 50 | 30 | non-toxigenic (diphtheriae) | |||||||||||||
| 2338 | NML160506-1 | C. diphtheriae | Mitis | Canada | Not documented | Human | Heel | PRJNA798684 | 1378 | 0_0_192_1_0_14_0_1_0_0 | C. diphtheriae | 0_0 | SL50 | ClG50 | GC11 | 2 | 2 | 4 | 1 | 3 | 3 | 2 | 50 | 30 | non-toxigenic (diphtheriae) | |||||||||||||
| 2362 | NML180009 | C. diphtheriae | Mitis | Canada | Not documented | Human | Foot ulcer | PRJNA798684 | 1397 | 0_0_192_1_0_14_0_3_0_0 | C. diphtheriae | 0_0 | SL50 | ClG50 | GC11 | 2 | 2 | 4 | 1 | 3 | 3 | 2 | 50 | 30 | non-toxigenic (diphtheriae) | |||||||||||||
| 2377 | NML151200 | C. diphtheriae | Mitis | Canada | Not documented | Human | Hand wound | PRJNA798684 | 1411 | 0_0_192_1_0_14_0_0_1_0 | C. diphtheriae | 0_0 | SL50 | ClG50 | GC11 | 2 | 2 | 4 | 1 | 3 | 3 | 2 | 50 | 30 | non-toxigenic (diphtheriae) | |||||||||||||
| 2379 | NML150834 | C. diphtheriae | Mitis | Canada | Not documented | Human | Foot | PRJNA798684 | 1413 | 0_0_192_1_0_14_0_0_0_0 | C. diphtheriae | 0_0 | SL50 | ClG50 | GC11 | 2 | 2 | 4 | 1 | 3 | 3 | 2 | 50 | 30 | non-toxigenic (diphtheriae) | |||||||||||||