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Schemes/Loci

Allele designations/scheme field values
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20 records returned. Click the hyperlinks for detailed information.

Isolate fields																cgMLST							cgMLST_ulcerans	MLST									Ribosomal MLST			spuA_island	tox
id	isolate	aliases	duplicate number	species	biovar	tox gene PCR	tox production Elek	country	travel history	host	source	infection or disease	other source info	resistance info	accession number	cgST	LINcode	Species	Lineage	Sublineage	Clonal group	Genetic cluster	cgST	atpA	dnaE	dnaK	fusA	leuA	odhA	rpoB	ST	clonal complex	rST	species	subspecies	amy (spuA)	TT	prediction
104	FRC0026			C. diphtheriae	Mitis	Negative	Negative	Mayotte	None	Human	Not documented	Wound			ERS4330843	97	0_1_0_0_0_0_0_0_0_0	C. diphtheriae	0_1	SL88	ClG853	GC92		3	1	5	2	3	23	2	88
354	FRC0001			C. diphtheriae	Mitis	Negative	Negative	Mayotte	Not documented	Human	Cutaneous	Not documented				338	0_1_0_0_0_0_0_1_0_0	C. diphtheriae	0_1	SL88	ClG853	GC92		3	1	5	2	3	23	2	88
356	FRC0003			C. diphtheriae	Mitis	Negative	Negative	Mayotte	Not documented	Human	Cutaneous	Not documented				340	0_1_0_0_0_1_0_0_0_0	C. diphtheriae	0_1	SL88	ClG853	GC92		3	1	5	2	3	23	2	88
403	FRC0201			C. diphtheriae	Mitis	Negative		France	Not documented	Human	Cutaneous	Not documented			ERS4330888	384	0_1_0_0_0_2_0_0_0_0	C. diphtheriae	0_1	SL88	ClG853	GC92		3	1	5	2	3	23	2	88
495	FRC0482			C. diphtheriae	Gravis	Negative		France	Not documented	Human	Cutaneous	Not documented			ERS4330963	1735 [+1 more] 466	0_1_0_4_0_0_0_0_0_0	C. diphtheriae	0_1	SL88	ClG520	GC291		3	5	5	2	3	23	20	520
510	FRC0507			C. diphtheriae	Mitis	Negative		Mayotte	Not documented	Human	respiratory	Not documented			ERS4330972	480	0_1_0_0_1_0_0_0_0_0	C. diphtheriae	0_1	SL88	ClG853	GC173		3	1	5	2	3	23	2	88
948	FRC0928			C. diphtheriae	Mitis	Negative		Réunion	Not documented	Human	Cutaneous	Finger wound				1990 [+1 more] 781	0_1_0_1_0_0_0_0_0_0	C. diphtheriae	0_1	SL88	ClG88	GC36		3	1	5	2	3	23	2	88
949	FRC0970			C. diphtheriae	Mitis	Negative		Réunion	Not documented	Human	Pus	Orthopedic abscess				1991 [+1 more] 782	0_1_0_1_0_0_0_1_0_0	C. diphtheriae	0_1	SL88	ClG88	GC36		3	1	5	2	3	23	2	88
950	FRC0975			C. diphtheriae	Mitis	Negative		Réunion	None	Human	Right foot	Wound right foot				1992 [+1 more] 783	0_1_0_1_0_0_0_0_1_0	C. diphtheriae	0_1	SL88	ClG88	GC36		3	1	5	2	3	23	2	88
1069	FRC0880			C. diphtheriae	Mitis	Negative		Mayotte	Not documented	Human	Cutaneous	Not documented				2063 [+1 more] 933	0_1_0_2_0_0_0_0_0_0	C. diphtheriae	0_1	SL88	ClG10093	GC736		3	1	5	2	3	23	2	88
1167	FRC0983			C. diphtheriae	Mitis	Negative		Mayotte	Not documented	Human	Cutaneous	Not documented				2109 [+1 more] 984	0_1_0_1_0_0_2_0_0_0	C. diphtheriae	0_1	SL88	ClG88	GC36		3	1	5	2	3	23	2	88
1199	FRC1065			C. diphtheriae	Mitis	Negative		Réunion	None	Human	ORL	Wound				2130 [+1 more] 1016	0_1_0_1_0_0_1_0_0_0	C. diphtheriae	0_1	SL88	ClG88	GC36		3	1	5	2	3	23	2	88
1206	FRC0763			C. diphtheriae	Mitis	Negative		New Caledonia	Not documented	Human	Cutaneous	Wound				2136 [+1 more] 1023	0_1_0_1_0_0_0_2_0_0	C. diphtheriae	0_1	SL88	ClG88	GC36		3	1	5	2	3	23	2	88
1457	FRC1168			C. diphtheriae	Mitis	Negative		Mayotte	not documented	Human	Cutaneous	Wound leg				2299 [+1 more] 1249	0_1_0_1_0_1_0_0_0_0	C. diphtheriae	0_1	SL88	ClG88	GC36		3	1	5	2	3	23	2	88
1472	FRC1191			C. diphtheriae	Mitis	Negative		Mayotte	not documented	Human	Cutaneous Foot	Wound diabetic foot				2309 [+1 more] 1264	0_1_0_1_0_2_0_0_0_0	C. diphtheriae	0_1	SL88	ClG88	GC36		3	1	5	2	3	23	2	88
1473	FRC1192			C. diphtheriae	Mitis	Negative		Mayotte	not documented	Human	Cutaneous	Wound				2310 [+1 more] 1265	0_1_0_1_0_2_0_1_0_0	C. diphtheriae	0_1	SL88	ClG88	GC36		3	1	5	2	3	23	2	88
1485	FRC0861			C. diphtheriae	Mitis	Negative		France	Comoros	human	Cutaneous					2316 [+1 more] 1274	0_1_0_3_0_0_0_0_0_0	C. diphtheriae	0_1	SL88	ClG10119	GC266		3	1	5	2	3	23	2	88
1496	FRC1205			C. diphtheriae	Mitis	Negative		Mayotte	Not documented	Human	Cutaneous fm foot	Diabetic foot				2325 [+1 more] 1284	0_1_0_1_0_2_0_0_1_0	C. diphtheriae	0_1	SL88	ClG88	GC36		3	1	5	2	3	23	2	88
2216	FRC1330			C. diphtheriae		Negative		Mayotte	Not documented	Human	Wound	Not documented				2343 [+1 more] 1308	0_1_0_1_0_4_0_0_0_0	C. diphtheriae	0_1	SL88	ClG88	GC36		3	1	5	2	3	23	2	88
2439	FRC1633			C. diphtheriae	Mitis	Negative		Mayotte	None	Human	Not documented					2374	0_1_0_0_2_0_0_0_0_0	C. diphtheriae	0_1	SL88	ClG853	GC492		3	1	165	2	3	23	2	853

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