Search or browse database

Restricted view: Note that you are currently restricted to viewing or downloading data that was submitted on or prior to 2024-12-31. Please log in to access the full dataset.

Enter search criteria or leave blank to browse all records. Modify form parameters to filter or enter a list of values.

Isolate provenance/primary metadata fields

Allele designations/scheme fields

Display/sort options

Order by:
Display: records per page

Action Reset

Modify form parameters

Click to add or remove additional query terms:

Provenance fields
Allele designations/scheme field values
Allele designation counts
Allele designation status
Sequence bin
Assembly checks
Tagged sequence counts
Tagged sequence status
Attribute values list
Filters

53 records returned (1 - 25 displayed). Click the hyperlinks for detailed information.

Isolate fields																cgMLST							cgMLST_ulcerans	MLST									Ribosomal MLST			spuA_island	tox
id	isolate	aliases	duplicate number	species	biovar	tox gene PCR	tox production Elek	country	travel history	host	source	infection or disease	other source info	resistance info	accession number	cgST	LINcode	Species	Lineage	Sublineage	Clonal group	Genetic cluster	cgST	atpA	dnaE	dnaK	fusA	leuA	odhA	rpoB	ST	clonal complex	rST	species	subspecies	amy (spuA)	TT	prediction
32	ISS4060			C. diphtheriae		Negative		Italy	Not documented	Human		Pharyngitis/tonsilitis			JAQN00000000	1449 [+1 more] 28	0_0_197_8_0_0_0_0_0_0	C. diphtheriae	0_0	SL5	ClG10194	GC824		2	4	4	1	3	3	5	5					12
75	SRR6816565	CD42		C. diphtheriae	Mitis			Australia	Not documented	Human	Cutaneous (site unknown)				PRJNA436425	1468 [+1 more] 69	0_0_197_10_1_0_0_0_0_0	C. diphtheriae	0_0	SL5	ClG10203	GC922		2	4	4	1	3	3	5	5
87	FRC0866			C. diphtheriae	Mitis	Negative		France	None	Human	Cutaneous	Wound on knee				1480 [+1 more] 928	0_0_197_9_1_8_1_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC23		2	4	4	1	3	3	5	5
197	768a	ASM220100v1		C. diphtheriae				Belarus	Not documented	Human	sore throat				GCA_002201005.1	1522 [+1 more] 184	0_0_197_11_0_0_0_0_0_0	C. diphtheriae	0_0	SL5	ClG728	GC580		2	9	4	1	3	3	5	728					30
209	5005	S73		C. diphtheriae	Mitis			Belarus	Not documented	Human	sore throat				GCA_002202745.1	1533 [+1 more] 196	0_0_197_9_1_5_0_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC23		2	4	4	1	3	3	5	5
210	209	ASM220332v1		C. diphtheriae				Belarus	Not documented	Human					GCA_002203325.1	1534 [+1 more] 197	0_0_197_3_0_0_0_0_0_0	C. diphtheriae	0_0	SL5	ClG741	GC556		2	4	4	1	94	3	5	741					12
211	2379	ASM220121v1		C. diphtheriae				Belarus	Not documented	Human	Sore throat				GCA_002201215.1	1535 [+1 more] 198	0_0_197_9_3_0_0_1_0_0	C. diphtheriae	0_0	SL5	ClG5	GC38		2	4	4	1	3	3	5	5
213	74	S27		C. diphtheriae	Mitis			Belarus	Not documented	Human		asymptomatic			GCA_002202345.1	1537 [+1 more] 200	0_0_197_9_2_0_0_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC937		2	4	4	1	3	3	5	5
215	631			C. diphtheriae	Belfanti			Belarus	Not documented	Human	sore throat					1539 [+1 more] 202	0_0_197_9_3_3_0_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC38		2	4	4	1	3	3	5	5
219	1137			C. diphtheriae	Belfanti			Belarus	Not documented	Human	sore throat					1543 [+1 more] 206	0_0_197_9_3_0_0_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC38		2	4	4	1	3	3	5	5
221	1734			C. diphtheriae	Belfanti			Belarus	Not documented	Human	sore throat					1545 [+1 more] 208	0_0_197_9_3_2_0_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC38		2	4	4	1	3	3	5	5
223	2686	S49		C. diphtheriae	Mitis			Belarus	Not documented	Human	sore throat				GCA_002202595.1	1547 [+1 more] 210	0_0_197_9_1_2_1_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC23		2	4	4	1	3	3	5	5
226	987	S67		C. diphtheriae	Mitis			Belarus	Not documented	Human	sore throat				GCA_002202665.1	1550 [+1 more] 212	0_0_197_9_1_0_0_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC23		2	4	4	1	3	3	5	5
228	1054	S68		C. diphtheriae	Gravis			Belarus	Not documented	Human					GCA_002202685.1	1552 [+1 more] 214	0_0_197_5_0_0_0_0_0_0	C. diphtheriae	0_0	SL5	ClG10014	GC144		2	4	4	1	3	3	5	5					12
229	4994	S72		C. diphtheriae	Gravis			Belarus	Not documented	Human	sore throat				GCA_002202735.1	1553 [+1 more] 215	0_0_197_2_0_3_0_0_0_0	C. diphtheriae	0_0	SL5	ClG10188	GC90		2	4	4	1	3	3	5	5					12
230	5085	S77		C. diphtheriae	Mitis			Belarus	Not documented	Human	sore throat				GCA_002202755.1	1554 [+1 more] 216	0_0_197_9_1_7_0_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC23		2	4	4	1	3	3	5	5
233	5171	S86		C. diphtheriae				Belarus	Not documented	Human	sore throat				GCA_002202825.1	1557 [+1 more] 219	0_0_197_9_5_0_0_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC485		2	4	4	1	3	3	5	5
234	5138	S87		C. diphtheriae	Gravis			Belarus	Not documented	Human	sore throat				GCA_002202835.1	1558 [+3 more] 220, 221, 1559	0_0_197_4_0_0_0_0_0_0	C. diphtheriae	0_0	SL5	ClG10274	GC265		2	4	4	1	3	3	5	5					33
235	5162	S88		C. diphtheriae	Gravis			Belarus	Not documented	Human	sore throat				GCA_002202845.1	1559 [+1 more] 221	0_0_197_4_0_0_0_0_0_0	C. diphtheriae	0_0	SL5	ClG10274	GC265		2	4	4	1	3	3	5	5					33
238	4552	S90		C. diphtheriae	Mitis			Belarus	Not documented	Human	sore throat				GCA_002202915.1	1562 [+1 more] 224	0_0_197_9_1_6_0_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC23		2	4	4	1	3	3	5	5
240	4499			C. diphtheriae	Belfanti			Belarus	Not documented	Human	sore throat					1564 [+1 more] 226	0_0_197_9_3_4_0_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC38		2	4	4	1	3	3	5	5
243	4288	S97		C. diphtheriae	Mitis			Belarus	Not documented	Human		diphtheria			GCA_002203015.1	1567 [+1 more] 229	0_0_197_9_1_3_0_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC23		2	4	4	1	3	3	5	5
245	4727	S105		C. diphtheriae	Gravis			Belarus	Not documented	Human	sore throat				GCA_002203065.1	1569 [+1 more] 231	0_0_197_2_0_2_0_0_0_0	C. diphtheriae	0_0	SL5	ClG10188	GC90		2	4	4	1	0	3	5						12
251	1556			C. diphtheriae	Belfanti			Belarus	Not documented	Human	sore throat					1575 [+1 more] 237	0_0_197_9_3_0_1_0_0_0	C. diphtheriae	0_0	SL5	ClG5	GC38		2	4	4	1	3	3	5	5
253	2163	S131		C. diphtheriae	Gravis			Belarus	Not documented	Human		asymptomatic			GCA_002203225.1	1577 [+1 more] 239	0_0_197_2_0_0_0_0_0_0	C. diphtheriae	0_0	SL5	ClG10188	GC90		2	4	4	1	0	3	5						12

Analysis tools

Breakdown:

Analysis:

Export:

Third party:

Search or browse database

Modify form parameters

Analysis tools

Dashboard settings